Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g02293 ATGGATTTAGATTTTGATTCTCATTTTTTTTCAAACCAAAACCTTAACTTCTTCGAAAACGCTGGAGACCCTTTTTCCTGGGACTACAATTTTGACGACATCTTCAACTTCAGTGACGACCAAACCAAGGAATCATCTTCCACGTCCAACGTTTCCGGCTCTGTGGGCAGCGTCGAGTTACAAGAAGTATCGTCCAACAACACAGCCTACGAAGAAGAACCCAAAGAAACAGAGTCACTGCCGGCGCCGGCGCCGGCGAAGGAGGGTAGGGTGTACAGAGGAGTGAGGAAGAGGCCGTGGGGGAAGTTCGCGGCGGAGATAAGGGATTCGACCCGAAACGGCGTTCGGGTGTGGATTGGAACGTTCGACACGGCGGAAGCGGCGGCTCTGGCTTATGACCAGGCGGCGTTTTCGACAAGGGGGTCTCTGGCGGTGCTGAATTTCCCGGAAGAAGTGGTGAGAGAGTCCCTGAAAGACATGCCGAGTAAGCCTTGGGAGGAAGGTTCCTCCCCTGTTTTGGCGCTCAAGAGAAAGCACACTATGAGGAGAAAGTCCAGTTTGAAGAAGAAGAAAAGTAAAAACGATGGCAGGGAGCAGTTGGAGTTCTGCGCCACTTCGCAGAATGTGCTGGTGTTCGAGGATTTGGGCGCTGAGTATCTAGAACAGCTTTTGAGTTTGACTTATTAG 687 0.5124 MDLDFDSHFFSNQNLNFFENAGDPFSWDYNFDDIFNFSDDQTKESSSTSNVSGSVGSVELQEVSSNNTAYEEEPKETESLPAPAPAKEGRVYRGVRKRPWGKFAAEIRDSTRNGVRVWIGTFDTAEAAALAYDQAAFSTRGSLAVLNFPEEVVRESLKDMPSKPWEEGSSPVLALKRKHTMRRKSSLKKKKSKNDGREQLEFCATSQNVLVFEDLGAEYLEQLLSLTY* 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g02293 228 PRINTS Ethylene responsive element binding protein signature 92 103 IPR001471 GO:0003700|GO:0006355
Phac1g02293 228 PRINTS Ethylene responsive element binding protein signature 115 131 IPR001471 GO:0003700|GO:0006355
Phac1g02293 228 ProSiteProfiles AP2/ERF domain profile. 91 149 IPR001471 GO:0003700|GO:0006355
Phac1g02293 228 CDD AP2 92 150 IPR001471 GO:0003700|GO:0006355
Phac1g02293 228 SMART rav1_2 91 155 IPR001471 GO:0003700|GO:0006355
Phac1g02293 228 Gene3D AP2/ERF domain 91 151 IPR036955 GO:0003700|GO:0006355
Phac1g02293 228 FunFam Ethylene-responsive transcription factor 2 90 150 - -
Phac1g02293 228 PANTHER DNA-BINDING DOMAIN 52 224 IPR044808 GO:0003700|GO:0009873
Phac1g02293 228 MobiDBLite consensus disorder prediction 41 68 - -
Phac1g02293 228 SUPERFAMILY DNA-binding domain 91 150 IPR016177 GO:0003677
Phac1g02293 228 MobiDBLite consensus disorder prediction 41 90 - -
Phac1g02293 228 Pfam AP2 domain 91 141 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g02293 Phac-Chr1 32680043 32681015 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g02293 17 224 AP2-EREBP Transcription Factor Family AT2G31230 45.957 1.11e-53 171
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Phac1g02293 AP2 2.1e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g02293 K14516 - gmx:100779524 321.627