Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g02292 ATGGAGGGAGGGAGAGGAGTTGTGAATGGAAACGCTTCAAACGCAGAGGTTATTAGGTACAGAGGGATTCGTAGGAGGCCATGGGGAAAGTTTGCAGCAGAGATTCGTGACCCTACAAGAAAAGGTGCTCGAATATGGCTTGGAACATTTGACACTGCTGAACAAGCTGCACGTGCTTACGATGCTGCTGCTTTTTATTTTCGGGGTCACAAGGCCATACTCAACTTCCCTAATGAGTATGGTCACACCACTCCTAATAATCCTATCTCGTTTTCAACTTCACTGCCTCTTCATTCTTCTTCTTCTTCTTTACCTTCTTACTCTGGTGGTGAGGGTTCGTCACAACAACAGCGAAATGGTGATGTAACTTTTGAATTGGAATACTTGGACAATAAGTTGTTGGAAGAACTCCTTCAGGCGCCTGATGGTTCAGGCAACGACTCCAATTAA 450 0.4511 MEGGRGVVNGNASNAEVIRYRGIRRRPWGKFAAEIRDPTRKGARIWLGTFDTAEQAARAYDAAAFYFRGHKAILNFPNEYGHTTPNNPISFSTSLPLHSSSSSLPSYSGGEGSSQQQRNGDVTFELEYLDNKLLEELLQAPDGSGNDSN* 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g02292 149 Gene3D AP2/ERF domain 18 78 IPR036955 GO:0003700|GO:0006355
Phac1g02292 149 PRINTS Ethylene responsive element binding protein signature 20 31 IPR001471 GO:0003700|GO:0006355
Phac1g02292 149 PRINTS Ethylene responsive element binding protein signature 43 59 IPR001471 GO:0003700|GO:0006355
Phac1g02292 149 ProSiteProfiles AP2/ERF domain profile. 19 77 IPR001471 GO:0003700|GO:0006355
Phac1g02292 149 SUPERFAMILY DNA-binding domain 19 78 IPR016177 GO:0003677
Phac1g02292 149 MobiDBLite consensus disorder prediction 83 122 - -
Phac1g02292 149 PANTHER DNA-BINDING DOMAIN 19 138 IPR044808 GO:0003700|GO:0009873
Phac1g02292 149 SMART rav1_2 19 83 IPR001471 GO:0003700|GO:0006355
Phac1g02292 149 Pfam AP2 domain 19 70 IPR001471 GO:0003700|GO:0006355
Phac1g02292 149 FunFam Ethylene-responsive transcription factor 2 19 78 - -
Phac1g02292 149 CDD AP2 19 78 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g02292 Phac-Chr1 32653250 32653982 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g02292 19 140 AP2-EREBP Transcription Factor Family AT3G23230 61.475 8.54e-40 129
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Phac1g02292 AP2 3e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g02292 - - gmx:100778998 197.593