Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g02291 ATGGGTTCCCCTTTCTTTGAGCTTTCAGATTGGGGCACATTGATGGAGCCTTCTGATATTTTGTTTGAACCATTTTCAAGCAAAGATACTGGTTATGACCCTTTCCATGACTGTCTTTCCTTTGATATGATTGATGACTCAAGGGATCCACAGGAACCAAGTGAAGTGATTGAAGCTATGGAAGTGGTGCAAACGGAGATCAGAGACGCGACGAGGAAAGGTACGAGGGTTTGGCTTGGAACGTTTGGTAATGCAGAAGAAGCTGCTTTGGCTTATGATCAAGCTGCATTTGTGATGAGAGGAACAAGTGCAGTGCTGAATTTTCCTGTCAAAAGGGTTATGGAGTCTTTACAAGAGCTGAATTATTTTGGTTGCAGAAAAGGGTGCTCTCCGGCATTGGAACTCAAAAAGAGGCACAACATGCGACGACAATTATCCTCAAAGCCTAAGGAAACTAAAACCAAACTGGAATTGGAAGAATCGAGTGTTTTGCCGGACTTGGGAGCTCAAGACACTTCATATCAGATCAAACTGCAAGCTTGA 543 0.4346 MGSPFFELSDWGTLMEPSDILFEPFSSKDTGYDPFHDCLSFDMIDDSRDPQEPSEVIEAMEVVQTEIRDATRKGTRVWLGTFGNAEEAALAYDQAAFVMRGTSAVLNFPVKRVMESLQELNYFGCRKGCSPALELKKRHNMRRQLSSKPKETKTKLELEESSVLPDLGAQDTSYQIKLQA* 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g02291 180 Pfam AP2 domain 71 101 IPR001471 GO:0003700|GO:0006355
Phac1g02291 180 ProSiteProfiles AP2/ERF domain profile. 40 109 IPR001471 GO:0003700|GO:0006355
Phac1g02291 180 SUPERFAMILY DNA-binding domain 66 110 IPR016177 GO:0003677
Phac1g02291 180 CDD AP2 66 110 IPR001471 GO:0003700|GO:0006355
Phac1g02291 180 PANTHER DNA-BINDING DOMAIN 66 161 IPR044808 GO:0003700|GO:0009873
Phac1g02291 180 SMART rav1_2 64 115 IPR001471 GO:0003700|GO:0006355
Phac1g02291 180 Gene3D AP2/ERF domain 63 111 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g02291 Phac-Chr1 32630618 32631214 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g02291 66 170 AP2-EREBP Transcription Factor Family AT3G23240 54.867 4.10e-34 118
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Phac1g02291 AP2 9.9e-08 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g02291 K14516 - gmx:100800600 217.624