Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g02289 ATGCAAGTTAAAGATTCATGCACAAGTGATACAATGGAGGACTTAAAGGAAAAGGTGAGTGAAGGGGAAGCAAAGAAAATTAAGTATAGAGGAGTAAGGAGGAGGCCATGGGGAAAGTTTGCATCAGAGATTAGAGATTCAGCAAGACATGGAGCTCGCGTGTGGCTTGGAACCTTTAACACAGCTGAGGAAGCAGCAAGAGCTTATGATCGTGCTGCCTTTGAAATGAGAGGTACTATGGCCATTCTCAACTTCCCACATGAACACCATCCTTGCAATGTGGCTACTCTTAGCAACAAGAGCTCATCATCTAAAACTGAACTTGGTAAACAAGTTGTGGTATTGGAGTGTCTGGATGATAAATTGTTAGAGGAACTCCTTGATTGTGATGACAAAACCATCAATCAAAACTTGGGCAACTAG 423 0.4232 MQVKDSCTSDTMEDLKEKVSEGEAKKIKYRGVRRRPWGKFASEIRDSARHGARVWLGTFNTAEEAARAYDRAAFEMRGTMAILNFPHEHHPCNVATLSNKSSSSKTELGKQVVVLECLDDKLLEELLDCDDKTINQNLGN* 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g02289 140 Coils Coil 135 140 - -
Phac1g02289 140 PANTHER DNA-BINDING DOMAIN 21 105 IPR044808 GO:0003700|GO:0009873
Phac1g02289 140 PRINTS Ethylene responsive element binding protein signature 29 40 IPR001471 GO:0003700|GO:0006355
Phac1g02289 140 PRINTS Ethylene responsive element binding protein signature 52 68 IPR001471 GO:0003700|GO:0006355
Phac1g02289 140 FunFam Ethylene-responsive transcription factor 2 28 88 - -
Phac1g02289 140 CDD AP2 28 87 IPR001471 GO:0003700|GO:0006355
Phac1g02289 140 Gene3D AP2/ERF domain 27 87 IPR036955 GO:0003700|GO:0006355
Phac1g02289 140 SUPERFAMILY DNA-binding domain 28 88 IPR016177 GO:0003677
Phac1g02289 140 ProSiteProfiles AP2/ERF domain profile. 28 86 IPR001471 GO:0003700|GO:0006355
Phac1g02289 140 SMART rav1_2 28 92 IPR001471 GO:0003700|GO:0006355
Phac1g02289 140 Pfam AP2 domain 28 78 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g02289 Phac-Chr1 32610978 32611400 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g02289 25 132 AP2-EREBP Transcription Factor Family AT3G23230 51.639 5.95e-40 129
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Phac1g02289 AP2 8.8e-16 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g02289 - - pvu:PHAVU_001G160100g 229.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac1g02289 1 32610978 32611400 Phac1g02289 1 32610978 32611400 ECH
Phac1g02289 1 32610978 32611400 Phac7g03780 7 38923998 38925476 PCT