Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Phac1g02288 | ATGGCACTCAACCACAACCCCTCTTACAAGCTTCTACATCAAGCTCCCCCACCCATCAAAACTCATGCTACCACAATCCATCACACACCACAACCTGCTTCAAATTCTGCTTCTGCTTTACCCATACTTGCCATCATTGTTCCCAGCATCTTTGTCACTGTTTTCATACTCATCACCTACTTAACTCTTCTCACCAAATTCTTCTCAAACTGGTACATTCTTAACCCCTTGAGATGGATTTTCACCTTACTTATCCCTCAACATGAAGATCAAGACCCCTTCATGGCACTCTCTCCAAGGATGTGGAGCCAAGGACTTGATGAATCTGCCATCAGAGAAATCCCGACACTTCAATTCACAAAAGGAGATGTTGAAAAGAATCAAAGTGTGTATGGCTGCGTGGTTTGTTTGACTGAGTTTCAAGATCATGATATGCTAAAAGTTCTTCCCATTTGCAAACATGCCTTTCACTTTCACTGCATTGACATATGGCTTCAAACCAATGCCAATTGCCCTCTTTGTAGATCAAACGTTATTTCTGGCAACACACACTGTCCAATGGATCATATCATAGCTCCAAGCTCTTCTCCTCAGGATTCTCAATTGCTCTCTTACGTGGGCAGTGATGAGGATTTTGTTGTCATTGAACTTGGGGGAGGAGAACACAGGGAGGCACTGCCGCAGATGCAACAAGAAAGAAGTGACTCAAGGGAAACAGTAGTAGAAAGTAGATGCCACTCTATTATAAGGAAGTGTCACCATGTTTCCATCATGGGAGATGAGTGCATTGGTGTTGGGAAGAAAGATGAGCAGTTTTCTATTCAGCCTATTCGAAGATCTTTCTCAATGGATTCAGCAAACACTAGGCAAGTTTACTTGGATTTTCAAATCATCATGCAACAGAATAATAGGCATCTAAATCAGGCTAGTGCCAATGAAGATTGCAATACCTGA | 954 | 0.4235 | MALNHNPSYKLLHQAPPPIKTHATTIHHTPQPASNSASALPILAIIVPSIFVTVFILITYLTLLTKFFSNWYILNPLRWIFTLLIPQHEDQDPFMALSPRMWSQGLDESAIREIPTLQFTKGDVEKNQSVYGCVVCLTEFQDHDMLKVLPICKHAFHFHCIDIWLQTNANCPLCRSNVISGNTHCPMDHIIAPSSSPQDSQLLSYVGSDEDFVVIELGGGEHREALPQMQQERSDSRETVVESRCHSIIRKCHHVSIMGDECIGVGKKDEQFSIQPIRRSFSMDSANTRQVYLDFQIIMQQNNRHLNQASANEDCNT* | 318 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Phac1g02288 | 317 | ProSiteProfiles | Zinc finger RING-type profile. | 133 | 175 | IPR001841 | - | |
Phac1g02288 | 317 | SUPERFAMILY | RING/U-box | 111 | 182 | - | - | |
Phac1g02288 | 317 | PANTHER | RING-H2 FINGER PROTEIN ATL16 | 18 | 308 | IPR044600 | GO:0016567|GO:0016740 | |
Phac1g02288 | 317 | FunFam | E3 ubiquitin-protein ligase ATL6 | 96 | 181 | - | - | |
Phac1g02288 | 317 | SMART | ring_2 | 133 | 174 | IPR001841 | - | |
Phac1g02288 | 317 | Pfam | Ring finger domain | 133 | 175 | IPR001841 | - | |
Phac1g02288 | 317 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 97 | 180 | IPR013083 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Phac1g02288 | Phac-Chr1 | 32607260 | 32608436 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Phac1g02288 | 33 | 306 | C3H Transcription Factor Family | AT1G04360 | 41.100 | 4.20e-61 | 197 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Phac1g02288 | K19041 | - | gmx:100809883 | 400.593 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Phac1g02288 | 1 | 32607260 | 32608436 | Phac1g02288 | 1 | 32607260 | 32608436 | ECH | |
Phac1g02288 | 1 | 32607260 | 32608436 | Phac7g02011 | 7 | 22180446 | 22182127 | PCT |