Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g02278 ATGACTGGTTCTCCTTGTGGAGCCTGCAAATTCTTGAGAAGGAAGTGTGTGAGAGGTTGTGTTTTTGCTCCTTACTTTTGCCATGAACAGGGTGCCACCCATTTTGCAGCCATTCATAAGGTCTTTGGTGCAAGCAATGTCTCAAAGCTCCTTGCTCACCTTCCTGTGAGTGACCGTTGTGAAGCTGCTGTCACTATCTCTTATGAAGCTCAAGCTAGACTTCAAGATCCAATTTATGGCTGTGTTGCTCATATTTTTTCACTCCAACAACAGGTGGTGAATTTACAAGCACAACTAGTTCATCTCAAGGAACAGGCAGGTCAGATCTATCTCAATGCCTCTGCCACTGAAACCCCTAATGAGAAATACTTAGGAAAATCTACCAATTTTCCCCAATATCTTGAGAGTTGGTTCCAGACGGAGAATTCCAACTCGTCTTCACAATTTCTTCCTAAATTGTCCACCAATACTTCAACACAGTATTATGGAAATACTAATACCTTCATGGACCCAAACCCTATTGGAAATGATGATGACAATTCCGTAACAGTAGCGGAAAGCATCTCCTTTTCTAGCTTTGAAGAGAGTTGTAACTCCATGTCCTGTGACATGCAAAGGCAGTGGAACTTTTATCAAGTGGATAACCTTCAGTAA 654 0.4205 MTGSPCGACKFLRRKCVRGCVFAPYFCHEQGATHFAAIHKVFGASNVSKLLAHLPVSDRCEAAVTISYEAQARLQDPIYGCVAHIFSLQQQVVNLQAQLVHLKEQAGQIYLNASATETPNEKYLGKSTNFPQYLESWFQTENSNSSSQFLPKLSTNTSTQYYGNTNTFMDPNPIGNDDDNSVTVAESISFSSFEESCNSMSCDMQRQWNFYQVDNLQ* 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g02278 217 Coils Coil 85 105 - -
Phac1g02278 217 ProSiteProfiles LOB domain profile. 4 106 IPR004883 -
Phac1g02278 217 PANTHER LOB DOMAIN CONTAINING PROTEIN 3 184 - -
Phac1g02278 217 Pfam Lateral organ boundaries (LOB) domain 5 103 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g02278 Phac-Chr1 32510514 32511553 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g02278 5 131 AS2 family AT3G58190 75.969 6.44e-70 211
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Phac1g02278 LOB 6.4e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g02278 K13945 K13944 gmx:100816960 343.969
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac1g02278 1 32510514 32511553 Phac1g02278 1 32510514 32511553 ECH