Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g02277 ATGGCTTCTGCAAGTGGAAATGGTAGCTCTAATGGCTCTGGCTCTCCTTGCGGGGCATGCAAGTTCCTCAGACGAAAGTGTGCAGCTGACTGCATCTTTGCACCTTACTTTTGCTCAGAACAAGGCCCTGCTAGATTTGCTGCCATACATAAAGTGTTTGGTGCCAGCAACGTTTCCAAGTTGCTTTTGCATATACCAGCTCATGATCGTTGTGAAGCCGTTGTCACAATTGCTTATGAGGCTCAGGCTCGTATCAGAGACCCCGTCTATGGCTGTGTCTCTCACATTTTTGCCTTACAACAACAGGTTGCATGCTTGCAAGCACAGCTGATGCAGGTGAAGGCTCAGCTGACTCAGAACCTGATGGAGTCCAGGAACATGGAGAATAATCATCAGTGGCCAGGGAATCAAAGTGTTGCAGGACAACCAATGAACCATCCATTTTGTCCCACTTACATGAACCCTATATCTCCTCAAAGCTCTCTTGAGTCAATTGATCACAGCAGCATCAATGATGGAATGAGCATGCAAGATATACAAAGCAGAGAGGATTTCCATATCCATGCTAAGGAAAGAGGATACAACAACAATGACTTAGGTGAGCTGCAAGAACTGGCACTCAGAATGATGAGGAACTGA 639 0.4632 MASASGNGSSNGSGSPCGACKFLRRKCAADCIFAPYFCSEQGPARFAAIHKVFGASNVSKLLLHIPAHDRCEAVVTIAYEAQARIRDPVYGCVSHIFALQQQVACLQAQLMQVKAQLTQNLMESRNMENNHQWPGNQSVAGQPMNHPFCPTYMNPISPQSSLESIDHSSINDGMSMQDIQSREDFHIHAKERGYNNNDLGELQELALRMMRN* 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g02277 212 Coils Coil 96 116 - -
Phac1g02277 212 PANTHER LOB DOMAIN CONTAINING PROTEIN 12 175 - -
Phac1g02277 212 Pfam Lateral organ boundaries (LOB) domain 16 114 IPR004883 -
Phac1g02277 212 ProSiteProfiles LOB domain profile. 15 117 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g02277 Phac-Chr1 32488542 32490519 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g02277 3 212 AS2 family AT2G42430 52.846 2.36e-79 236
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Phac1g02277 LOB 8.2e-37 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac1g02277 1 32488542 32490519 Phac1g02277 1 32488542 32490519 ECH