Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g02270 ATGGACTTAAACTACCCACAAGACCATGATCTGGTGGGAACTGGGAGATCCTACGAGTGCATCTTTTGCAAGAGAGGCTTCACCACAGCACAAGCCTTAGGTGGACACATGAACATACACAGAAAAGAAAGGGCCAACAAGACCAAACCCACTTTCCCTCCTCCTCCTTCAACTTCTAACAAACCTGATGGAATCAACAACTATGCAGATCTCGTCTTCCATTCACAAATTCCAACCCACTCCACTTCTCCTGATGCTAATAGCTTCCGTGACGTTTGTTTTTCAGCCACTGCACTGACTGTTAGACCTTCCCATGGTGAGGTTTTGTGTGCAGAAAAAAATCAACTCGGACACGTGTTTGTGCAGGATTGGAAGACCAGAAATTTTAGCTTCTACACTAATCCTTTGTGTTTTCATGAAATGAACAAGTTTGAAGACACTGAAGAGAATGGCCTGGATTTGGAGCTGAGGTTGGGTCATCATCCATAG 489 0.4458 MDLNYPQDHDLVGTGRSYECIFCKRGFTTAQALGGHMNIHRKERANKTKPTFPPPPSTSNKPDGINNYADLVFHSQIPTHSTSPDANSFRDVCFSATALTVRPSHGEVLCAEKNQLGHVFVQDWKTRNFSFYTNPLCFHEMNKFEDTEENGLDLELRLGHHP* 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g02270 162 Gene3D Classic Zinc Finger 9 61 - -
Phac1g02270 162 MobiDBLite consensus disorder prediction 41 64 - -
Phac1g02270 162 Pfam C2H2-type zinc finger 18 43 - -
Phac1g02270 162 SUPERFAMILY beta-beta-alpha zinc fingers 16 45 IPR036236 -
Phac1g02270 162 ProSiteProfiles Zinc finger C2H2 type domain profile. 18 45 IPR013087 -
Phac1g02270 162 PANTHER OS07G0101800 PROTEIN 15 161 - -
Phac1g02270 162 ProSitePatterns Zinc finger C2H2 type domain signature. 20 40 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g02270 Phac-Chr1 32439335 32440832 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g02270 18 79 C2H2 Transcription Factor Family AT5G43540 48.387 1.23e-14 65.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g02270 - - gmx:102664910 220.705