Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Phac1g02268 | ATGGAAGGAAACTATCTGACCAGAAACACGCATAAAGGGGATAGGTTTGGCTTTGAGGAGCTTTCATGGGGAAGTTCATGGCCTGCTAGAAACTATGCTTGTAGCTTTTGTAAGAGAGAGTTCAAGTCTGCTCAAGCCTTGGGTGGCCACATGAATGTTCACAGAAGGGATAGGGCAAGATTGAGATCTTCCTTACCCTCATCATCATGGGTTTCTGAGTGTCCTAAACCTAACCCTAGCATTGTGCCTAACCACACTCATCTTTCACCCTCCCCTCCATCGTCGTGTCTATCTAACAATAACCTTTTGAATTGTGCTCATTGTTCTCCACTTTATAGCCCTTCTTTGACTTTGTCGTTTTCACTGACCCCGCCGGTTTCTCTCAATGGAGACAAGAAACCAAGACTCGCATCTTCTCAGTTTCTTCCTCTTTCGGTTTCTCAGGAAAATGAGGAAATTAAGATTTGTAAGAACAAAGAGATTGGTTTGGGAGTTGAAGAAGAACAGGGTTGTGCAATAGGGGAGGAATGCAAGGTTTGCAAGAGTAGTGAGCATAACATCAAGCTGGAGTTGGGAATAGGGTTTATCAAACAAGCAGAGAAGTTAGATTTGGAGCTACGACTGGGGCACTAA | 633 | 0.4408 | MEGNYLTRNTHKGDRFGFEELSWGSSWPARNYACSFCKREFKSAQALGGHMNVHRRDRARLRSSLPSSSWVSECPKPNPSIVPNHTHLSPSPPSSCLSNNNLLNCAHCSPLYSPSLTLSFSLTPPVSLNGDKKPRLASSQFLPLSVSQENEEIKICKNKEIGLGVEEEQGCAIGEECKVCKSSEHNIKLELGIGFIKQAEKLDLELRLGH* | 211 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Phac1g02268 | 210 | SUPERFAMILY | beta-beta-alpha zinc fingers | 29 | 58 | IPR036236 | - | |
Phac1g02268 | 210 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 32 | 59 | IPR013087 | - | |
Phac1g02268 | 210 | SMART | c2h2final6 | 32 | 54 | IPR013087 | - | |
Phac1g02268 | 210 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 34 | 54 | IPR013087 | - | |
Phac1g02268 | 210 | Gene3D | Classic Zinc Finger | 21 | 74 | - | - | |
Phac1g02268 | 210 | Pfam | C2H2-type zinc finger | 32 | 56 | - | - | |
Phac1g02268 | 210 | PANTHER | OS07G0101800 PROTEIN | 16 | 210 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Phac1g02268 | Phac-Chr1 | 32388967 | 32390188 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Phac1g02268 | 24 | 209 | C2H2 Transcription Factor Family | AT3G23130 | 41.799 | 3.98e-28 | 103 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | C2H2 | Phac1g02268 | zf-C2H2_6 | 6.9e-07 | CL0361 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Phac1g02268 | - | - | gmx:102660083 | 254.218 |