Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g02268 ATGGAAGGAAACTATCTGACCAGAAACACGCATAAAGGGGATAGGTTTGGCTTTGAGGAGCTTTCATGGGGAAGTTCATGGCCTGCTAGAAACTATGCTTGTAGCTTTTGTAAGAGAGAGTTCAAGTCTGCTCAAGCCTTGGGTGGCCACATGAATGTTCACAGAAGGGATAGGGCAAGATTGAGATCTTCCTTACCCTCATCATCATGGGTTTCTGAGTGTCCTAAACCTAACCCTAGCATTGTGCCTAACCACACTCATCTTTCACCCTCCCCTCCATCGTCGTGTCTATCTAACAATAACCTTTTGAATTGTGCTCATTGTTCTCCACTTTATAGCCCTTCTTTGACTTTGTCGTTTTCACTGACCCCGCCGGTTTCTCTCAATGGAGACAAGAAACCAAGACTCGCATCTTCTCAGTTTCTTCCTCTTTCGGTTTCTCAGGAAAATGAGGAAATTAAGATTTGTAAGAACAAAGAGATTGGTTTGGGAGTTGAAGAAGAACAGGGTTGTGCAATAGGGGAGGAATGCAAGGTTTGCAAGAGTAGTGAGCATAACATCAAGCTGGAGTTGGGAATAGGGTTTATCAAACAAGCAGAGAAGTTAGATTTGGAGCTACGACTGGGGCACTAA 633 0.4408 MEGNYLTRNTHKGDRFGFEELSWGSSWPARNYACSFCKREFKSAQALGGHMNVHRRDRARLRSSLPSSSWVSECPKPNPSIVPNHTHLSPSPPSSCLSNNNLLNCAHCSPLYSPSLTLSFSLTPPVSLNGDKKPRLASSQFLPLSVSQENEEIKICKNKEIGLGVEEEQGCAIGEECKVCKSSEHNIKLELGIGFIKQAEKLDLELRLGH* 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g02268 210 SUPERFAMILY beta-beta-alpha zinc fingers 29 58 IPR036236 -
Phac1g02268 210 ProSiteProfiles Zinc finger C2H2 type domain profile. 32 59 IPR013087 -
Phac1g02268 210 SMART c2h2final6 32 54 IPR013087 -
Phac1g02268 210 ProSitePatterns Zinc finger C2H2 type domain signature. 34 54 IPR013087 -
Phac1g02268 210 Gene3D Classic Zinc Finger 21 74 - -
Phac1g02268 210 Pfam C2H2-type zinc finger 32 56 - -
Phac1g02268 210 PANTHER OS07G0101800 PROTEIN 16 210 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g02268 Phac-Chr1 32388967 32390188 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g02268 24 209 C2H2 Transcription Factor Family AT3G23130 41.799 3.98e-28 103
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Phac1g02268 zf-C2H2_6 6.9e-07 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g02268 - - gmx:102660083 254.218