Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g02254 ATGCCTGCCCACGCGCTTCCAATCCACAAACACTCTCCGCCGCCGCCCAGAGAGGTCCATTTCAGAGGCGTCCGCAAGCGTCCCTGGGGCCGTTTCGCCGCCGAGATCCGCGATCCTTGGAAAAAGACCCGAAAGTGGCTCGGAACCTTCGACACCGCCGAGGAAGCCGCCAGGGCCTACGACACCGCAGCCAGAACGCTCCGAGGGCCCAAGGCCAAAACCAACTTCACCTACGTTGTTGCTCCCCCGGTGCCCGCTGCCCCTGAGTCCCAGGCCCAAGCCCATGACCGACTCGCCAGACCGGTCGAGTTCTGGGGTCTGCCTTTGTTTTTCACTACGGAAGCAGCTTCCGGAGCGCCGGTGAGGTCGGAGTACAAGGGTTACAAGTTGGAGAACATTGCGGGTTTTGTGGTTACCAAGGAGGAGGATAAGAAGCCGTTTTTGTTCGACCTTAATCTGCCGGCGCCACTCTTCTAA 477 0.6038 MPAHALPIHKHSPPPPREVHFRGVRKRPWGRFAAEIRDPWKKTRKWLGTFDTAEEAARAYDTAARTLRGPKAKTNFTYVVAPPVPAAPESQAQAHDRLARPVEFWGLPLFFTTEAASGAPVRSEYKGYKLENIAGFVVTKEEDKKPFLFDLNLPAPLF* 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g02254 158 Gene3D AP2/ERF domain 19 79 IPR036955 GO:0003700|GO:0006355
Phac1g02254 158 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 19 92 - -
Phac1g02254 158 Pfam AP2 domain 20 69 IPR001471 GO:0003700|GO:0006355
Phac1g02254 158 PRINTS Ethylene responsive element binding protein signature 21 32 IPR001471 GO:0003700|GO:0006355
Phac1g02254 158 PRINTS Ethylene responsive element binding protein signature 43 59 IPR001471 GO:0003700|GO:0006355
Phac1g02254 158 ProSiteProfiles AP2/ERF domain profile. 20 77 IPR001471 GO:0003700|GO:0006355
Phac1g02254 158 FunFam Ethylene-responsive transcription factor 2 19 78 - -
Phac1g02254 158 SUPERFAMILY DNA-binding domain 20 78 IPR016177 GO:0003677
Phac1g02254 158 SMART rav1_2 20 83 IPR001471 GO:0003700|GO:0006355
Phac1g02254 158 CDD AP2 20 76 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g02254 Phac-Chr1 32218517 32219378 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g02254 17 76 AP2-EREBP Transcription Factor Family AT5G44210 88.333 3.66e-32 112
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Phac1g02254 AP2 1.5e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g02254 K09286 - gmx:100816599 236.113