Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g02250 ATGGCTCTTTCTTCCTCTCTGCTCCAACTTCAACCCTCTTCACTAAAGAAAACTGCAGTTTCCAGAAATTGGATTCTGCTGGACCACCATGGCAAACCCACTGTGCTGGATGCAGACAAGCATGCTATCATGCGTCTGGTTAAAATTCACGCCAGGGATCTTCGGATTCTCGATCCTCTCTTATCGTATCCCTCCACCATTTTGGGCAGAGACAAAGTCATTGTTCTCAATTTAGAGCACATTAAAGCTATTATCACTGCAGATGAGGTGTTGCTAAGAGACCCAACGGATGATGACGTTGTGCCAATAGTTGAAGAGCTTCGACGACGGTTACCCAAAGTAAGTGCTTCTGGGGAAGGCCAAGGAGAAGAAGAGGCGTGTGTTCAAGATGGGGAGGGTGGAGAAGAAAATGAATTTCCATTTGAGATACGAGCTTTGGAAGTTTTATTTGAAGCCATTTGTAGTTTCCTTGACGCACGAACGAGAGAGTTAGAGACTGCTGCTTATCCAGCTTTGGACGAACTTACCTCTAAGATTAGCAGTCGTAACTTGGATAGAGTGAGAAAATTGAAATGTGCAATGACGAGGTTGACAAGTCGTGTTCAAAAGATTAGAGATGAACTAGAAAACCTACTTGATGATGACGACGACATGGCTGATCTTTACTTATCAAGAAAGTCGACTGTTTCATCATCTCCAACAAGTAGCTCTGATGCTCCCAAGTGGCTTTATGGTTCTCCAAATAAAGGTTCCAAAATACACAAATCAAGCAGAGCAAGTGGAACAACAGTTCACAGGGAGGATGGTGTTGAGGAGCTTGAAATGTTACTTGAGGCCAATTTCATGCAAATTGATGGCACATTAAATAAGTTGGCCACATTGCGAGAATATATCGATGACACAGAAGATTACATCAACATACAGCTTGACAATCACCGAAACCAGCTGATTCAGCTGGAGCTCTTCATTAGTGCCGGGACTGTGTGTATGTCCTTATATTCATTGGTGGCTGCAATATTTGGTATGAACATTCCATACACATGGAAAGCACCAGGCCACGAACATGTGTTTAAATGGGTGGTGATCTTTGCGGGAATGGTTTGTGCATCCCTGTTTTTATCCATAGTATCTTATGCCCGACGCAAAGGCCTTGTTGGGTCTTGA 1164 0.4347 MALSSSLLQLQPSSLKKTAVSRNWILLDHHGKPTVLDADKHAIMRLVKIHARDLRILDPLLSYPSTILGRDKVIVLNLEHIKAIITADEVLLRDPTDDDVVPIVEELRRRLPKVSASGEGQGEEEACVQDGEGGEENEFPFEIRALEVLFEAICSFLDARTRELETAAYPALDELTSKISSRNLDRVRKLKCAMTRLTSRVQKIRDELENLLDDDDDMADLYLSRKSTVSSSPTSSSDAPKWLYGSPNKGSKIHKSSRASGTTVHREDGVEELEMLLEANFMQIDGTLNKLATLREYIDDTEDYINIQLDNHRNQLIQLELFISAGTVCMSLYSLVAAIFGMNIPYTWKAPGHEHVFKWVVIFAGMVCASLFLSIVSYARRKGLVGS* 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g02250 387 Coils Coil 187 214 - -
Phac1g02250 387 MobiDBLite consensus disorder prediction 114 133 - -
Phac1g02250 387 FunFam Magnesium transporter MRS2-1 13 95 - -
Phac1g02250 387 CDD Mrs2_Mfm1p-like 24 384 IPR039204 -
Phac1g02250 387 MobiDBLite consensus disorder prediction 226 242 - -
Phac1g02250 387 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 13 385 IPR039204 -
Phac1g02250 387 Gene3D - 6 95 - -
Phac1g02250 387 Pfam CorA-like Mg2+ transporter protein 276 374 IPR002523 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Phac1g02250 387 MobiDBLite consensus disorder prediction 226 264 - -
Phac1g02250 387 Gene3D Magnesium transport protein CorA, transmembrane region 103 316 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g02250 Phac-Chr1 32172668 32176646 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g02250 1 360 MRS2 Gene Family AT5G64560 69.837 1.52e-156 444
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g02250 K16075 - gmx:100799368 648.277