Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g02230 ATGGAGGTTGGCCTGAAGAAGGAGAACATGGGGTTTGAAGAAACTGAGCTAAGGCTTGGACTGCCTGGAAACGCTGCCTCAGCCACTGAAGAAGTGCTAAGGAAGAGAGGATTCTCTGAGACTGAAACTCAGGATGACACTGCCACAGTGGATTTGATGCTTAATCTTTCATCTAAGGAACCAACCACTGGAGCAGATCCAACTCATAAGCACAACACCTTGCCTAAGGAGAAGACCCTTTTGCCTGCAGATCCTGCTAAGCCTCCAGCCAAGGCACAGGTGGTGGGTTGGCCACCTGTGCGGTCCTTCCGGAAGAACATGTTAGCTGTGCAGAAGAGTGTTGGAGAAGAGAGTGAAAAGAACAGCAGCCCTAATGCAAGCTTTGTGAAAGTTAGCATGGATGGAGCACCTTATCTGCGCAAAGTGGACTTGAAGATGTATAAGAGTTACCGCGAGCTCTCTGATTCTTTAGGCAAAATGTTCAGCTCCTTCACCATTGGGAATTGTGAATCCCAAGGAATGAAGGATTTCATGAATGAGAGCAAACTGATGGATCTTTTGAACAGCTCTGATTATGTCCCAACCTATGAGGACAAGGATGGTGACTGGATGCTTGTCGGTGATGTCCCATGGGAGATGTTTGTTGAATCATGCAAGCGTTTACGCATTATGAAAGGAAAGGAGGCTATTGGCCTTGGTCTTGCACCAAGAGCCATGGCAAAAAGCAAGAACAGGAGCTAG 741 0.475 MEVGLKKENMGFEETELRLGLPGNAASATEEVLRKRGFSETETQDDTATVDLMLNLSSKEPTTGADPTHKHNTLPKEKTLLPADPAKPPAKAQVVGWPPVRSFRKNMLAVQKSVGEESEKNSSPNASFVKVSMDGAPYLRKVDLKMYKSYRELSDSLGKMFSSFTIGNCESQGMKDFMNESKLMDLLNSSDYVPTYEDKDGDWMLVGDVPWEMFVESCKRLRIMKGKEAIGLGLAPRAMAKSKNRS* 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g02230 246 ProSiteProfiles PB1 domain profile. 126 226 IPR000270 GO:0005515
Phac1g02230 246 MobiDBLite consensus disorder prediction 57 94 - -
Phac1g02230 246 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 11 231 IPR003311 GO:0005634|GO:0006355
Phac1g02230 246 Pfam AUX/IAA family 14 233 IPR033389 -
Phac1g02230 246 SUPERFAMILY CAD & PB1 domains 117 225 - -
Phac1g02230 246 FunFam Auxin-responsive protein 121 237 - -
Phac1g02230 246 Gene3D - 120 237 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g02230 Phac-Chr1 32080728 32084662 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g02230 116 229 B3 DNA Binding Superfamily AT4G23980 34.211 2.64e-09 55.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Phac1g02230 AUX_IAA 5.7e-84 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g02230 K14484 - gmx:100810013 422.55