Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g02229 ATGGGGAGCTATCAAACTGAGCTCAATCTTAAGGCCACAGAGTTAAGGTTGGGATTGCCTGGGAGTGATGAGCCTCAAGAGATACGTTCATGCAGTGGCTCTGTTGTTAGAAGCAGCAACAAGAGATCTTCACCAGAATCCAGTGTGGAAGAGTCCAGGTGCAAAACCAACATTAACTCTGACACTTCTGACTCCACAACCACAAGTGATCACGACCAAGACACTGTCCAACCTGCAAAGGTACAAGTAGTGGGGTGGCCACCAATTAGATCTTTTAGGAAGAACAGTCTACAACAGAAGAAGGTGGAGCAGGGCGATGGAACTGGAATGTACGTAAAAGTCAGCATGGCTGGTGCACCTTACTTGAGGAAGATAGATCTAAAGGTTTACCAAAGCTACCCAGAACTCCTCATGGCCTTGCAAAATTTGTTCAAGTGCACATTTGGTGAATATTCAGAAAGAGAAGGATACAACGGATCTGAATACGCCCCTACTTATGAAGACAAGGATGGTGACTGGATGCTGGTTGGAGATGTTCCATGGAACATGTTTGTATCCTCCTGCAAAAGGCTGAGAATAATCAAAGGATCAGAAGCAAAGGGGTTGGGTTGTTTATGA 618 0.4531 MGSYQTELNLKATELRLGLPGSDEPQEIRSCSGSVVRSSNKRSSPESSVEESRCKTNINSDTSDSTTTSDHDQDTVQPAKVQVVGWPPIRSFRKNSLQQKKVEQGDGTGMYVKVSMAGAPYLRKIDLKVYQSYPELLMALQNLFKCTFGEYSEREGYNGSEYAPTYEDKDGDWMLVGDVPWNMFVSSCKRLRIIKGSEAKGLGCL* 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g02229 205 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 8 200 IPR003311 GO:0005634|GO:0006355
Phac1g02229 205 Pfam AUX/IAA family 13 203 IPR033389 -
Phac1g02229 205 MobiDBLite consensus disorder prediction 27 43 - -
Phac1g02229 205 SUPERFAMILY CAD & PB1 domains 105 193 - -
Phac1g02229 205 Gene3D - 104 205 - -
Phac1g02229 205 FunFam Auxin-responsive protein 104 205 - -
Phac1g02229 205 MobiDBLite consensus disorder prediction 17 77 - -
Phac1g02229 205 MobiDBLite consensus disorder prediction 50 76 - -
Phac1g02229 205 ProSiteProfiles PB1 domain profile. 109 201 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g02229 Phac-Chr1 32060188 32061959 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g02229 100 202 B3 DNA Binding Superfamily AT2G46530 35.922 2.76e-12 63.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX or IAA Phac1g02229 AUX_IAA 1.2e-59 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g02229 K14484 - gmx:100792134 333.183