Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g02223 ATGGAGTCTCACGGCGGAGGACCCCTTCGTTCCCGCAGTTCCCAGTCCCCTTCTCCTTCCCACTCCGCCTCAGCCTCCGCCACATCCTCCATCCACAAGCGCAAGCGCGCGTCTGAGGACCACGTGCCCCCCTTCCCGCCCTCCTCCTTCTCCGCCGACACGCGCGACGGCGCCCTCACCTCCAATGACGACCTGGAGAGCATCTCCGCCCGAGGCGCCGACTCCGACTCAGACGACGACTCCGAGGACGCCGTCGTCGACGATGACGAGGACGACTACGACAACGACTCCTCCATGCGCACCTTCACCGCCTCCAGACTCGGTAATCCTCCCTCTGCTCCCCGCAATTCAAAGCTCAAGACTGATAACTCCACTGTCAAAATTGAGAACTCCGACGGCGCAAAAGACCCCGTAAACGTCGGAGCCGGTGCCGCCGAGGCCGTTGGATCCGTCCCTGGCATTGTGGTTAAGGAGGACCCGACTAAGATTTTTACTGATAATTTGCAAACGAGTGGGGCTTACACAGCTCGGGAAGAGAGTCTCAAGAAGGAGGAGGAAGCGGGAAGGCTTAAATTCGTATGCCATTCAAACGATGGTGTTGATGAGCATATGGTCTGGTTGATTGGATTGAAGAATATATTTGCTAGACAACTTCCCAATATGCCCAAGGAGTACATTGTCCGGCTTGTCATGGATAGGAGCCACAAGTCTGTAATGGTTATCAGGCGTAATCACGTTGTTGGAGGCATTACATATCGCCCATATGCTAGCCAGAAGTTTGGTGAGATAGCCTTTTGTGCAATTACAGCTGATGAGCAAGTAAAGGGTTATGGTACCAGATTGATGAATCACTTAAAACAGTATGCACGTGATGTGGATGGGCTGACACATTTTCTCACATATGCTGACAACAATGCTGTTGGCTATTTTATCAAACAGGGATTTACAAAAGAGATTCACTTGGAGAAAGATCGATGGCAAGGTTATATAAAGGATTATGACGGAGGAATTCTCATGGAATGCAAGATAGATCCAAAGCTCCCTTACACTGATTTGTCAACTATGATCCGTCGTCAAAGGCAGGCTATTGATGAAAAAATCAGAGAGCTGTCAAACTGTCACATAGTCTATACCGGAATTGATTTTCAGAAGAAAGAAGCTGGCATTCCGAAAAAAATTATTGATGACATCCCCGGTTTGAGGGAGGCTGGATGGACTCCTGATCAGTGGGGTCATTCACGATTCAGAAGTCTAAATGTCTCTACTGACAATACCACTAATCAAAAACATTTGTCTGGTTTTATGCGATCACTTCTAAAGTCAATGCATGATCATGCCGACGCTTGGCCATTCAAGGAACCAGTTGATGCACGGGATGTTCCTGATTATTATGACATCATCAAAGATCCAATGGATTTGAAGACAATGTCCAAGAGGGTGGAGTCAGAGCTATATTATGTAACATTTGAGATGTTTGTTGCGGATGTCAGAAGAATGTTTGCGAATGCGCGCACCTATAATTCTCCAGAAACCATTTATTACAAATGTGCTACAAGGTTAGAATCCCACTTTCAAAGCAAAGTACAAGCGGGTCTCCAGCCTGGTTCCAAAATTCAGTAG 1620 0.4802 MESHGGGPLRSRSSQSPSPSHSASASATSSIHKRKRASEDHVPPFPPSSFSADTRDGALTSNDDLESISARGADSDSDDDSEDAVVDDDEDDYDNDSSMRTFTASRLGNPPSAPRNSKLKTDNSTVKIENSDGAKDPVNVGAGAAEAVGSVPGIVVKEDPTKIFTDNLQTSGAYTAREESLKKEEEAGRLKFVCHSNDGVDEHMVWLIGLKNIFARQLPNMPKEYIVRLVMDRSHKSVMVIRRNHVVGGITYRPYASQKFGEIAFCAITADEQVKGYGTRLMNHLKQYARDVDGLTHFLTYADNNAVGYFIKQGFTKEIHLEKDRWQGYIKDYDGGILMECKIDPKLPYTDLSTMIRRQRQAIDEKIRELSNCHIVYTGIDFQKKEAGIPKKIIDDIPGLREAGWTPDQWGHSRFRSLNVSTDNTTNQKHLSGFMRSLLKSMHDHADAWPFKEPVDARDVPDYYDIIKDPMDLKTMSKRVESELYYVTFEMFVADVRRMFANARTYNSPETIYYKCATRLESHFQSKVQAGLQPGSKIQ* 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g02223 539 Gene3D - 186 350 - -
Phac1g02223 539 SMART bromo_6 424 533 IPR001487 GO:0005515
Phac1g02223 539 CDD NAT_SF 237 291 - -
Phac1g02223 539 MobiDBLite consensus disorder prediction 8 31 - -
Phac1g02223 539 Pfam Bromodomain 436 518 IPR001487 GO:0005515
Phac1g02223 539 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 197 344 IPR000182 GO:0016747
Phac1g02223 539 CDD Bromo_gcn5_like 434 530 - -
Phac1g02223 539 PRINTS Bromodomain signature 495 514 IPR001487 GO:0005515
Phac1g02223 539 PRINTS Bromodomain signature 446 459 IPR001487 GO:0005515
Phac1g02223 539 PRINTS Bromodomain signature 460 476 IPR001487 GO:0005515
Phac1g02223 539 ProSiteProfiles Bromodomain profile. 443 514 IPR001487 GO:0005515
Phac1g02223 539 FunFam Histone acetyltransferase KAT2A 187 351 - -
Phac1g02223 539 MobiDBLite consensus disorder prediction 53 68 - -
Phac1g02223 539 ProSitePatterns Bromodomain signature. 448 506 IPR018359 -
Phac1g02223 539 Pfam Acetyltransferase (GNAT) family 237 315 IPR000182 GO:0016747
Phac1g02223 539 MobiDBLite consensus disorder prediction 1 139 - -
Phac1g02223 539 MobiDBLite consensus disorder prediction 98 130 - -
Phac1g02223 539 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 205 349 IPR016181 -
Phac1g02223 539 Gene3D - 412 533 IPR036427 GO:0005515
Phac1g02223 539 PANTHER GH11602P 24 536 IPR037800 GO:0004402
Phac1g02223 539 SUPERFAMILY Bromodomain 418 529 IPR036427 GO:0005515
Phac1g02223 539 MobiDBLite consensus disorder prediction 76 95 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g02223 Phac-Chr1 32010383 32018204 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Phac1g02223 Bromodomain 8.2e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g02223 K06062 - gmx:100813942 965.681