Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g02206 ATGAACTATTTGTACCCTGTGAAAGAAGAGTACTTGGAATCGCCACCACCATCATCGCCAACGTCTCAAACAGGAGCTGATGAGTCAACAATGGTTCCACTTCCGAGGCCAATGGAGAGGCTTCACGAAGTAGGGCCACCCCCATTTCTGACCAAGACTTATGATGCAGTGGAGAACCCCACCACTAGCCACATAGTTTCATGGAGCAGAGGCGGTGCCAGCTTTGTGGTTTGGGATCCTCACGCTTTCTCCAGAGACCTTCTCCCTCGATACTTCAAGCACAACAATTTCTCCAGCTTTGTACGGCAACTAAACACTTACGGCTTTAGAAAAATTGATCCCGATAAGTGGGAGTTTGCAAACGAAGGATTCCTGAGAGGGCACAGGCACCTTTTGGCAAACATAAGGAGAAGAAAGCAACCTTCTCAGCCTTCTACTCAACAAGGACAAGGTCACTGTGTTGAAGTTGGCCATTTTGGACTTGATGAGGAGGTTGATCGTTTGAAGCGTGACAAGCACGTGTTAATGATGGAGCTTGTGAAGCTGAGACAGCAGCAGCTGAATACCAGATCGCACCTTGAGGAAATGGAGGAGAGGCTACGAGGGACTGAAATTAAGCAGCAACAGATGATGGCCTTCTTGGCTAGAGCTCTGAAGAACCCCACCTTCATCCAGCAGCTACTCCAGCAGAAAGAGAAGAGGAAGGAGCTTGAAGAGGCCATCTCAAAGAAGAGGAGAAGACCAATTGAGCAAGGACCAAGAGGGGTTGGAGAATCAAGCATTGGAAGGGAAGGAATAAGCAGCGTTAAAGTGGAGTCCCAAGTGTTTGGGGAATATGGATTTGGAGTCTCAGAGTTGGAAGTTCTGGCTTTGGAGATGCAAGGTTATGGTAGGGGAAAAAGGGAACAAGAAGAAGAGCCTGAGGCACTAGAATCACAAGAGAGGTTGGAGAAAGAGCTCGATGAAGGTTTCTGGGAAGAACTGTTCAGTGAGGGTTTTGAGGGTGAATTACATCTTCCAACTTCACAAGACCAAGATGAGGAAGAAGATGTCAATGTGTTAGCCAATCGCTTTGGTTACTTAGGGTCAAGTCCTAGATGA 1101 0.475 MNYLYPVKEEYLESPPPSSPTSQTGADESTMVPLPRPMERLHEVGPPPFLTKTYDAVENPTTSHIVSWSRGGASFVVWDPHAFSRDLLPRYFKHNNFSSFVRQLNTYGFRKIDPDKWEFANEGFLRGHRHLLANIRRRKQPSQPSTQQGQGHCVEVGHFGLDEEVDRLKRDKHVLMMELVKLRQQQLNTRSHLEEMEERLRGTEIKQQQMMAFLARALKNPTFIQQLLQQKEKRKELEEAISKKRRRPIEQGPRGVGESSIGREGISSVKVESQVFGEYGFGVSELEVLALEMQGYGRGKREQEEEPEALESQERLEKELDEGFWEELFSEGFEGELHLPTSQDQDEEEDVNVLANRFGYLGSSPR* 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g02206 366 SMART hsfneu3 45 138 IPR000232 GO:0003700|GO:0006355|GO:0043565
Phac1g02206 366 PRINTS Heat shock factor (HSF) domain signature 49 72 IPR000232 GO:0003700|GO:0006355|GO:0043565
Phac1g02206 366 PRINTS Heat shock factor (HSF) domain signature 87 99 IPR000232 GO:0003700|GO:0006355|GO:0043565
Phac1g02206 366 PRINTS Heat shock factor (HSF) domain signature 100 112 IPR000232 GO:0003700|GO:0006355|GO:0043565
Phac1g02206 366 MobiDBLite consensus disorder prediction 15 29 - -
Phac1g02206 366 Gene3D - 42 139 IPR036388 -
Phac1g02206 366 SUPERFAMILY "Winged helix" DNA-binding domain 45 138 IPR036390 -
Phac1g02206 366 Coils Coil 165 199 - -
Phac1g02206 366 MobiDBLite consensus disorder prediction 10 33 - -
Phac1g02206 366 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 35 257 IPR027725 -
Phac1g02206 366 Pfam HSF-type DNA-binding 49 138 IPR000232 GO:0003700|GO:0006355|GO:0043565
Phac1g02206 366 ProSitePatterns HSF-type DNA-binding domain signature. 88 112 IPR000232 GO:0003700|GO:0006355|GO:0043565
Phac1g02206 366 FunFam Heat shock transcription factor 1 42 139 - -
Phac1g02206 366 Coils Coil 227 247 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g02206 Phac-Chr1 31771236 31774959 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g02206 22 364 HSF AT3G22830 51.715 9.67e-126 366
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Phac1g02206 HSF_DNA-bind 5e-32 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g02206 K09419 - gmx:100794264 579.326