Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g02195 ATGGAGCAGTATGAAATTCTAGAACAAATTGGCAAGGGTGCATTTGGTTCTGCTCTGCTTGTGAGGCATAGGCACGAAAAGAAAAAGTATGTCCTTAAGAAGATTCGTCTTGCTCGCCAAACTGACAGAACCCGTAGATCTGCTCACCAGGAGATGGAGCTTATCTCTAAAGTTCGAAATCCATTTATTGTGGAGTATAAAGATTCCTGGGTTGAAAAGGGTTGTTTTGTATGTATCATCATTGGCTATTGTGAAGGAGGGGATATGGCTGAAGCTATAAAAAAGGCTAACGGTGTTAACTTCTCTGAAGAGAAACTTTGCAAGTGGCTCGTTCAATTGCTGATGGCTCTTGATTACTTGCATGTAAATCATATCCTTCATCGTGACGTCAAGTGTTCAAATATATTCTTGACAAAAGATCGAGATATTCGTCTAGGGGACTTTGGGCTTGCTAAAATGTTGACATCTGATGATCTTGCTTCCTCAGTCGTTGGGACTCCAAGTTATATGTGCCCAGAGCTTCTTGCTGATATACCCTATGGCTCCAAGTCAGATATCTGGTCTTTGGGATGCTGTATCTATGAAATGGCTGCTCACAAGCCAGCTTTTAAAGCACTTGACATACAATCATTGATTAACAAAATAAACAAGTGTATAGTAGCTCCCATGCCAGCTATGTATACTGCTGCTTTTCGGGGGCTTGTCAAAAGTATGCTGCGGAAAAATCCAGAGCTGAGGCCAACTGCTTCAGAATTACTAAATCATCCGCATCTTCAGCCTTACATTCAAAAGATTCACCTTAAATTAAATAGCCCCAGAAGAAGTACTTTTCCTTTCCAATGGCCCGAGCCAAGTTACGTAAGGAGAACTCGCTACGTAGAGCCAGAATCTGTTTCTACTCTTTCTGACCAAGATAAATTCTTGTCATTTAGCAAGGACAGGGCACTGAATCCTAGTATTTCTGGAACTGAACAAGTTTCTCAGTGTTCTACTCAAAGAGCACATGGATTATCCTCTTGTTCAGAAGAGAAAATCTATGAACTATCTGTAGGTTGTGTACGTAACAAATACAATGCTGACACATCAAAAGCCACAAAGCTCTCAACAGTTGAAAGAACACCAAGATTGAGGGCCGTTACAGCTGCTGCCTCCGCCAAAAGGCAAACAATGGCACCATCAAAGACAACCTATACTGGTCCAAAACGAGATTCACTTCCAGTATCTAATGCACCATCTGGAAGGTTTTCCTCACCACCAAGAGCCAGGGCGAAAGCAAACTTGTACACCAATTTTTGTGTCCTTGGAAATTTGAACTCTCCTAATGTCTCTGTTAATGCACCACGAATCGACAAGATGGCTGAATTCCCAATGGCTTTCTGTGAGGATCCCTTTCTCCCTATCCGTGGACCATCATTAACTTCAGCTCACTGCTCTTCAAGCTCAACACGGAGTACTACGGATATCTCCATCACAATGGACAAGTGTTTAATCCTGGAGGACAAAGTTACTGTCCCCAACAGTATCAGTTATGCTTGCCCTGGTCCAAAGGGAACTGAATGCCGTTCTGAGCATGTAAAAGCTTGTGTTTCAAGTCGCTCCTCTGCTGAGGTGGATCAGCGCCGGTTTGACACGTCCTCATACCAGCAGCGGGCAGAGGCATTGGAGGGTTTGCTGGAGTTCAGTGCCAGACTCCTAAAACAACAAAAGTTTGAAGAGCTTGGGGTGTTGCTGAAGCCGTTCGGGCCTGAGAAGGTTTCCCCCAGGGAAACAGCTATTTGGTTGACCAAGAGCTTTAAGGAAACTGTGGTCTAA 1812 0.4365 MEQYEILEQIGKGAFGSALLVRHRHEKKKYVLKKIRLARQTDRTRRSAHQEMELISKVRNPFIVEYKDSWVEKGCFVCIIIGYCEGGDMAEAIKKANGVNFSEEKLCKWLVQLLMALDYLHVNHILHRDVKCSNIFLTKDRDIRLGDFGLAKMLTSDDLASSVVGTPSYMCPELLADIPYGSKSDIWSLGCCIYEMAAHKPAFKALDIQSLINKINKCIVAPMPAMYTAAFRGLVKSMLRKNPELRPTASELLNHPHLQPYIQKIHLKLNSPRRSTFPFQWPEPSYVRRTRYVEPESVSTLSDQDKFLSFSKDRALNPSISGTEQVSQCSTQRAHGLSSCSEEKIYELSVGCVRNKYNADTSKATKLSTVERTPRLRAVTAAASAKRQTMAPSKTTYTGPKRDSLPVSNAPSGRFSSPPRARAKANLYTNFCVLGNLNSPNVSVNAPRIDKMAEFPMAFCEDPFLPIRGPSLTSAHCSSSSTRSTTDISITMDKCLILEDKVTVPNSISYACPGPKGTECRSEHVKACVSSRSSAEVDQRRFDTSSYQQRAEALEGLLEFSARLLKQQKFEELGVLLKPFGPEKVSPRETAIWLTKSFKETVV* 604
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g02195 603 ProSitePatterns Protein kinases ATP-binding region signature. 10 33 IPR017441 GO:0005524
Phac1g02195 603 PANTHER SERINE/THREONINE-PROTEIN KINASE NEK 1 559 - -
Phac1g02195 603 FunFam Serine/threonine-protein kinase Nek3 86 332 - -
Phac1g02195 603 MobiDBLite consensus disorder prediction 386 415 - -
Phac1g02195 603 MobiDBLite consensus disorder prediction 381 419 - -
Phac1g02195 603 FunFam Serine/threonine-protein kinase Nek2 1 83 - -
Phac1g02195 603 Gene3D Phosphorylase Kinase; domain 1 1 83 - -
Phac1g02195 603 Pfam Protein kinase domain 4 257 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac1g02195 603 Gene3D Transferase(Phosphotransferase) domain 1 86 307 - -
Phac1g02195 603 ProSitePatterns Serine/Threonine protein kinases active-site signature. 125 137 IPR008271 GO:0004672|GO:0006468
Phac1g02195 603 ProSiteProfiles Protein kinase domain profile. 4 258 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac1g02195 603 SUPERFAMILY Protein kinase-like (PK-like) 1 327 IPR011009 -
Phac1g02195 603 CDD STKc_Nek 3 258 - -
Phac1g02195 603 SMART serkin_6 4 258 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g02195 Phac-Chr1 31692893 31700654 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g02195 10 259 MAP Kinase Kinase Kinase AT1G53570 30.980 1.09e-35 139
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK NEK Phac1g02195 Pkinase 1.1e-63 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g02195 K08857 - gmx:100792678 1016.53