Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g02143 ATGATGCCAAACATGCCGCCAACCGGAGAAAGAAGAAGAAAAAGAAACAACCTTAGCCGCTTGAACTTGAACCTATGTTTCTCAAGTCCCATGCAACCGTTCACACCACAATCTCACCCTACAATCCCTACCGCCACCTCTTCAACCCTTCTTCAAAATCAAAGCTCTCCATCACAATCCGCCACGTCACCGTCCCCGATCATAAACTTCAACTACGATCCTACTAACCCATTCCCGAGCCTCGGACCCGAACCCGAACCCGAACCTGCTGACCTGGCCTCCGCCTTCGTCTCCCAACGCTTCTTCTTCACTGACCCCGGTCGCTCCAACTCTATCGTCGAATCCACCATCACCGACGCCGATTGGGCCACCTCCTCATCCTCGCTTGAAAAACCCGTCGCCACTGTCGACGAGAAGGCGAAAGCTGCGCTTGACGGCAGCGTTGCGGTGGAGATGTACTCGCCGAACCCCTACGCAGATTTCCGCCGCTCCATGGAGGAGATGGTGGCGGCGCGCCCCGAGTTGATCGACGTGGCGGCCAATTGGAAAGCGTTGCACGAGCTTCTTCTCTGCTACCTCGCGCTCAACCCGAGGAGCACTCACAAGTTCATCCTCTGCGCTTTTTCTGATCTTCTTCTCAGCCTCATCTCGCTCTCTTCTCCTCCGCCGCAGGATCCCGGTGCCGGCGACGTTGCCGTCGGTGGTGATGGATGTTCGATTTAG 723 0.5629 MMPNMPPTGERRRKRNNLSRLNLNLCFSSPMQPFTPQSHPTIPTATSSTLLQNQSSPSQSATSPSPIINFNYDPTNPFPSLGPEPEPEPADLASAFVSQRFFFTDPGRSNSIVESTITDADWATSSSSLEKPVATVDEKAKAALDGSVAVEMYSPNPYADFRRSMEEMVAARPELIDVAANWKALHELLLCYLALNPRSTHKFILCAFSDLLLSLISLSSPPPQDPGAGDVAVGGDGCSI* 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g02143 240 MobiDBLite consensus disorder prediction 29 76 - -
Phac1g02143 240 ProSiteProfiles OVATE domain profile. 150 214 IPR006458 -
Phac1g02143 240 NCBIfam uncharacterized plant-specific domain TIGR01568 148 216 IPR006458 -
Phac1g02143 240 Pfam Transcriptional repressor, ovate 154 215 IPR006458 -
Phac1g02143 240 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 55 215 IPR038933 GO:0045892
Phac1g02143 240 MobiDBLite consensus disorder prediction 221 240 - -
Phac1g02143 240 MobiDBLite consensus disorder prediction 29 89 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g02143 Phac-Chr1 31439279 31440582 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Phac1g02143 Ovate 3.7e-23 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g02143 - - pvu:PHAVU_001G153000g 395.201