Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g02105 ATGGCTGCACCGCCAAATAGCAGGCTTCAAAGCATGTTAAGGGCTGCAGTGCAATCAGTTCAGTGGACTTACAGCCTCTTCTGGCAACTTTGTCCTCAACAAGGGATTTTGACGTGGGGTGATGGGTACTACAACGGAGCAATTAAGACTAGGAAGACAGTTCAAGCAATGGAAGTGAGCACTGAAGAAGCTTCTCTGCAAAGAAGCGAGCAACTTCGAGAGTTATATGAATCGTTGTCTGCTGGAGAAGCAAACGCGCAAACTCGAAGACCATGTGCTGCTTTGTCTCCTGAAGATCTAACGGAATCAGAATGGTTCTATTTGTTGTGTGTATCTTTCTCCTTTCTTCCTGGTGTCGGGTTGCCCGGAACAGCATATGCCAGGAGGCAGCATTTATGGCTCACTGGTGCAAACGAAGTAGACAGCAGAACATTTTCCAGAGCTATTCTTGCCAAGAGTGCTCATATTCAGACAGTGGTGTGCATTCCTGTGTTGGAGGGCGTGGTTGAGCTGGGCACAACTGAGAAGATGGAAGAAGACCTAAATTTCATCCAACACATAAAGAGTTTCTTCCTAGATGAGCAGCCTCCAACGGCAAAGCCTGCAGTGTCAGAGCATTCCACATCCAATCCCACTTCTTCTTCATACCCTGTTCTTGTCACTGCTACTACTGCCTCGCCCAACAATATTCCCAACCAAAAACACATGAACGTGGTTCATAAAGGAGAAGAAGAACCTAAGTTCAACTCTGAAGCAGGATTAGTAGTTCATAACACTTTCATACCCACCGAACTAATGGAGCTCGACACGTTGGAGGAGTTTCGGGTCGGGTCACCCGGAGATGGCTCCAACCACTTGGATTCCTTCCCCACAGAGGAATCCATGGCACTGTGTTCTGCAGGCTTGGAACTTCTTCATCTTCAACTACCACCTCAACCTCCAGAACATCCTCCGACAGAAAACATAGCACAAGGCGACACAGACACTCACTACTCTCAGACAGTGTCCAGCATCCTCCAAAAGAACTCTGGGTGGTGGCCGGACTCACCCTCCGTCAACCACCTCACTGATTCCTTCCAATCAGCTTTCAACAAATGGAACTCCGGCACCGACGAGTACCAGGGTCACTTTCACATGACGGTGGCAGACGTCACCTCTCAGTGGCTCCTCAAGTACATCCTCTTCAGTGTTCCTTACCTGCACGCCAACCGGCTAAAGGGCAAGGGCGCCCCGTCATACGAGACCAGCCATGTGATGGCGGAGCGCCGTCGGAGAGAGAAGCTGAATGAGAGGTTTCTGACTTTGCGTTCAATGGTACCGTTTGTAACCAGAATGGACAAGGCATCCATTCTGGGAGACACCATCGAATACATAAAACAGCTAAGGGAGAAGATTGAGAGCCTGGAGGCACGTGAGCGGCACCCGGGGAAGAGGAGGATGAGGGAGGTGGAGGTTTCGATCATAGAGAACGATGCACTGTTGGAGTTGGAGTGTGTGCATAGGGAAGGGTTGTTGCTGGATGTGATGACAATGTTGAGGGAGTTAGGGGTGGAAGTGATGATGGTGCAATCGTGGGTTAGGGATGATGGAGTGTTTGTCGCAGAGATGAGGGCCAGAGTCAAGGAAAATGGTAAGGCGAAAAAGACTATTGTGGACGTAAAGAATGCCCTAAACCAGATTATACCCCGTCATATACCTCACCATGACCCATACACACTGCCTTCCAATGATCATTTTTAA 1740 0.4925 MAAPPNSRLQSMLRAAVQSVQWTYSLFWQLCPQQGILTWGDGYYNGAIKTRKTVQAMEVSTEEASLQRSEQLRELYESLSAGEANAQTRRPCAALSPEDLTESEWFYLLCVSFSFLPGVGLPGTAYARRQHLWLTGANEVDSRTFSRAILAKSAHIQTVVCIPVLEGVVELGTTEKMEEDLNFIQHIKSFFLDEQPPTAKPAVSEHSTSNPTSSSYPVLVTATTASPNNIPNQKHMNVVHKGEEEPKFNSEAGLVVHNTFIPTELMELDTLEEFRVGSPGDGSNHLDSFPTEESMALCSAGLELLHLQLPPQPPEHPPTENIAQGDTDTHYSQTVSSILQKNSGWWPDSPSVNHLTDSFQSAFNKWNSGTDEYQGHFHMTVADVTSQWLLKYILFSVPYLHANRLKGKGAPSYETSHVMAERRRREKLNERFLTLRSMVPFVTRMDKASILGDTIEYIKQLREKIESLEARERHPGKRRMREVEVSIIENDALLELECVHREGLLLDVMTMLRELGVEVMMVQSWVRDDGVFVAEMRARVKENGKAKKTIVDVKNALNQIIPRHIPHHDPYTLPSNDHF* 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g02105 579 Coils Coil 451 471 - -
Phac1g02105 579 MobiDBLite consensus disorder prediction 196 216 - -
Phac1g02105 579 Pfam Helix-loop-helix DNA-binding domain 415 462 IPR011598 GO:0046983
Phac1g02105 579 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 413 474 IPR036638 GO:0046983
Phac1g02105 579 PANTHER TRANSCRIPTION FACTOR TT8 3 562 - -
Phac1g02105 579 SMART finulus 418 467 IPR011598 GO:0046983
Phac1g02105 579 Gene3D - 410 473 IPR036638 GO:0046983
Phac1g02105 579 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 412 461 IPR011598 GO:0046983
Phac1g02105 579 MobiDBLite consensus disorder prediction 201 216 - -
Phac1g02105 579 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 9 191 IPR025610 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g02105 Phac-Chr1 30961079 30971925 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g02105 330 561 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G09820 47.521 2.66e-55 193
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Phac1g02105 bHLH-MYC_N 9.6e-53 CL0161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g02105 - - gmx:100780422 885.56