Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g02104 ATGGCTGCACCGCCAAATAGCAGGCTTCAAAGCATGTTAAGGGCTGCAGTGCAATCAGTTCAGTGGACTTACAGCCTCTTCTGGCAACTTTGTCCTCAACAAGGGATTTTGACGTGGGGTGATGGGTACTACAACGGAGCAATTAAGACTAGGAAGACAGTTCAAGCAATGGAAGTGAGCACTGAAGAAGCTTCTCTGCAAAGAAGCGAGCAACTTCGAGAGTTATATGAATCGTTGTCTGCTGGAGAAGCAAACGCGCAAACTCGAAGACCATGTGCTGCTTTGTCTCCTGAAGATCTAACGGAATCAGAATGGTTCTATTTGTTGTGTGTATCTTTCTCCTTTCTTCCTGGTGTCGGGTTGCCCGGAACAGCATATGCCAGGAGGCAGCATTTATGGCTCACTGGTGCAAACGAAGTAGACAGCAGAACATTTTCCAGAGCTATTCTTGCCAAGAGTGCTCATATTCAGGTGAAAATTTTCCCAATGGCTTTTCCATTTCTGACAGTGGTGTGCATTCCTGTGTTGGAGGGCGTGGTTGAGCTGGGCACAACTGAGAAGATGGAAGAAGACCTAAATTTCATCCAACACATAAAGAGTTTCTTCCTAGATGAGCAGCCTCCAACGGCAAAGCCTGCAGTGTCAGAGCATTCCACATCCAATCCCACTTCTTCTTCATACCCTGTTCTTGTCACTGCTACTACTGCCTCGCCCAACAATATTCCCAACCAAAAACACATGAACGTGGTTCATAAAGGAGAAGAAGAACCTAAGTTCAACTCTGAAGCAGGATTAGTAGTTCATAACACTTTCATACCCACCGAACTAATGGAGCTCGACACGTTGGAGGAGTTTCGGGTCGGGTCACCCGGAGATGGCTCCAACCACTTGGATTCCTTCCCCACAGAGGAATCCATGGCACTGTGTTCTGCAGGCTTGGAACTTCTTCATCTTCAACTACCACCTCAACCTCCAGAACATCCTCCGACAGAAAACATAGCACAAGGCGACACAGACACTCACTACTCTCAGACAGTGTCCAGCATCCTCCAAAAGAACTCTGGGTGGTGGCCGGACTCACCCTCCGTCAACCACCTCACTGATTCCTTCCAATCAGCTTTCAACAAATGGAACTCCGGCACCGACGAGTACCAGGGTCACTTTCACATGACGGTGGCAGACGTCACCTCTCAGTGGCTCCTCAAGTACATCCTCTTCAGTGTTCCTTACCTGCACGCCAACCGGCTAAAGGGCAAGGGCGCCCCGTCATACGAGACCAGCCATGTGATGGCGGAGCGCCGTCGGAGAGAGAAGCTGAATGAGAGGTTTCTGACTTTGCGTTCAATGGTACCGTTTGTAACCAGAATGGACAAGGCATCCATTCTGGGAGACACCATCGAATACATAAAACAGCTAAGGGAGAAGATTGAGAGCCTGGAGGCACGTGAGCGGCACCCGGGGAAGAGGAGGATGAGGGAGGTGGAGGTTTCGATCATAGAGAACGATGCACTGTTGGAGTTGGAGTGTGTGCATAGGGAAGGGTTGTTGCTGGATGTGATGACAATGTTGAGGGAGTTAGGGGTGGAAGTGATGATGGTGCAATCGTGGGTTAGGGATGATGGAGTGTTTGTCGCAGAGATGAGGGCCAGAGTCAAGGAAAATGGTAAGGCGAAAAAGACTATTGTGGACGTAAAGAATGCCCTAAACCAGATTATACCCCGTCATATACCTCACCATGACCCATACACACTGCCTTCCAATGATCATTTTTAA 1773 0.4901 MAAPPNSRLQSMLRAAVQSVQWTYSLFWQLCPQQGILTWGDGYYNGAIKTRKTVQAMEVSTEEASLQRSEQLRELYESLSAGEANAQTRRPCAALSPEDLTESEWFYLLCVSFSFLPGVGLPGTAYARRQHLWLTGANEVDSRTFSRAILAKSAHIQVKIFPMAFPFLTVVCIPVLEGVVELGTTEKMEEDLNFIQHIKSFFLDEQPPTAKPAVSEHSTSNPTSSSYPVLVTATTASPNNIPNQKHMNVVHKGEEEPKFNSEAGLVVHNTFIPTELMELDTLEEFRVGSPGDGSNHLDSFPTEESMALCSAGLELLHLQLPPQPPEHPPTENIAQGDTDTHYSQTVSSILQKNSGWWPDSPSVNHLTDSFQSAFNKWNSGTDEYQGHFHMTVADVTSQWLLKYILFSVPYLHANRLKGKGAPSYETSHVMAERRRREKLNERFLTLRSMVPFVTRMDKASILGDTIEYIKQLREKIESLEARERHPGKRRMREVEVSIIENDALLELECVHREGLLLDVMTMLRELGVEVMMVQSWVRDDGVFVAEMRARVKENGKAKKTIVDVKNALNQIIPRHIPHHDPYTLPSNDHF* 591
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g02104 590 SMART finulus 429 478 IPR011598 GO:0046983
Phac1g02104 590 MobiDBLite consensus disorder prediction 212 227 - -
Phac1g02104 590 Pfam Helix-loop-helix DNA-binding domain 426 473 IPR011598 GO:0046983
Phac1g02104 590 PANTHER TRANSCRIPTION FACTOR TT8 3 573 - -
Phac1g02104 590 Coils Coil 462 482 - -
Phac1g02104 590 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 9 202 IPR025610 -
Phac1g02104 590 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 424 485 IPR036638 GO:0046983
Phac1g02104 590 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 423 472 IPR011598 GO:0046983
Phac1g02104 590 Gene3D - 421 484 IPR036638 GO:0046983
Phac1g02104 590 MobiDBLite consensus disorder prediction 207 227 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g02104 Phac-Chr1 30961079 30971925 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g02104 341 572 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G09820 47.521 2.83e-55 193
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Phac1g02104 bHLH-MYC_N 4e-48 CL0161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g02104 - - gmx:100780422 877.085