Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g02103 ATGGAAGAAGACCTAAATTTCATCCAACACATAAAGAGTTTCTTCCTAGATGAGCAGCCTCCAACGGCAAAGCCTGCAGTGTCAGAGCATTCCACATCCAATCCCACTTCTTCTTCATACCCTGTTCTTGTCACTGCTACTACTGCCTCGCCCAACAATATTCCCAACCAAAAACACATGAACGTGGTTCATAAAGGAGAAGAAGAACCTAAGTTCAACTCTGAAGCAGGATTAGTAGTTCATAACACTTTCATACCCACCGAACTAATGGAGCTCGACACGTTGGAGGAGTTTCGGGTCGGGTCACCCGGAGATGGCTCCAACCACTTGGATTCCTTCCCCACAGAGGAATCCATGGCACTGTGTTCTGCAGGCTTGGAACTTCTTCATCTTCAACTACCACCTCAACCTCCAGAACATCCTCCGACAGAAAACATAGCACAAGGCGACACAGACACTCACTACTCTCAGACAGTGTCCAGCATCCTCCAAAAGAACTCTGGGTGGTGGCCGGACTCACCCTCCGTCAACCACCTCACTGATTCCTTCCAATCAGCTTTCAACAAATGGAACTCCGGCACCGACGAGTACCAGGGTCACTTTCACATGACGGTGGCAGACGTCACCTCTCAGTGGCTCCTCAAGTACATCCTCTTCAGTGTTCCTTACCTGCACGCCAACCGGCTAAAGGGCAAGGGCGCCCCGTCATACGAGACCAGCCATGTGATGGCGGAGCGCCGTCGGAGAGAGAAGCTGAATGAGAGGTTTCTGACTTTGCGTTCAATGGTACCGTTTGTAACCAGAATGGACAAGGCATCCATTCTGGGAGACACCATCGAATACATAAAACAGCTAAGGGAGAAGATTGAGAGCCTGGAGGCACGTGAGCGGCACCCGGGGAAGAGGAGGATGAGGGAGGTGGAGGTTTCGATCATAGAGAACGATGCACTGTTGGAGTTGGAGTGTGTGCATAGGGAAGGGTTGTTGCTGGATGTGATGACAATGTTGAGGGAGTTAGGGGTGGAAGTGATGATGGTGCAATCGTGGGTTAGGGATGATGGAGTGTTTGTCGCAGAGATGAGGGCCAGAGTCAAGGAAAATGGTAAGGCGAAAAAGACTATTGTGGACGTAAAGAATGCCCTAAACCAGATTATACCCCGTCATATACCTCACCATGACCCATACACACTGCCTTCCAATGATCATTTTTAA 1212 0.4983 MEEDLNFIQHIKSFFLDEQPPTAKPAVSEHSTSNPTSSSYPVLVTATTASPNNIPNQKHMNVVHKGEEEPKFNSEAGLVVHNTFIPTELMELDTLEEFRVGSPGDGSNHLDSFPTEESMALCSAGLELLHLQLPPQPPEHPPTENIAQGDTDTHYSQTVSSILQKNSGWWPDSPSVNHLTDSFQSAFNKWNSGTDEYQGHFHMTVADVTSQWLLKYILFSVPYLHANRLKGKGAPSYETSHVMAERRRREKLNERFLTLRSMVPFVTRMDKASILGDTIEYIKQLREKIESLEARERHPGKRRMREVEVSIIENDALLELECVHREGLLLDVMTMLRELGVEVMMVQSWVRDDGVFVAEMRARVKENGKAKKTIVDVKNALNQIIPRHIPHHDPYTLPSNDHF* 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g02103 403 MobiDBLite consensus disorder prediction 25 40 - -
Phac1g02103 403 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 236 285 IPR011598 GO:0046983
Phac1g02103 403 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 237 298 IPR036638 GO:0046983
Phac1g02103 403 Gene3D - 234 297 IPR036638 GO:0046983
Phac1g02103 403 MobiDBLite consensus disorder prediction 19 40 - -
Phac1g02103 403 PANTHER TRANSCRIPTION FACTOR TT8 2 386 - -
Phac1g02103 403 Coils Coil 275 295 - -
Phac1g02103 403 SMART finulus 242 291 IPR011598 GO:0046983
Phac1g02103 403 Pfam Helix-loop-helix DNA-binding domain 239 286 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g02103 Phac-Chr1 30961079 30971925 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g02103 154 385 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G09820 47.521 1.12e-56 192
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Phac1g02103 HLH 4.7e-14 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g02103 - - gmx:100780422 561.607