Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g02092 ATGGATCGAGGGCATGAACGGGGACCTTACAATATGAATTCTAGACCTTATGATAGGAACATGGTTCCTGATGGTTGGCTTGACTGCCCAGCACATGGACAAGAATTAGGACGCATAATCCCTTCAAAGGTTCCACTTGGTGAATCTTTCAATGATTACATTCCACGTGAAACATATACTCCTAAACAAGCAATTCATCAGCAAAGAGTCTTAGGTCGGGAACTTGGTTTAGTGATTGATCTGACAAATACTACTCGTTATTATCCTCTATCAGATTGGACTAAAGAAGGAATTGGTCATGTCAAGATAAGATGCAAAGGAAGGGATGCTGTACCTGATGATGAATCTGTAAAGCAATTCTGTGATGAGGTTAAAGATTTTTGCTCCCAAAGAACAAATGAAAAGAAATATATACTTGTACATTGCACCCATGGGCATAATCGCACAGGTTATATGATTGTTCACTTTCTTGTGCGTACGGAATCTATATCTGTTACTGAGGCGATAAATAAATTTGCTTTGGCACGTCACCCAGGAATTTACAAACAGGACTATATTGACGCCCTGTACATGTTTTATCATGAAAAGAAGCCTGAAGATCTTGTTTGTCCTCAAACTCCTGAATGGAAGAGAACTTCTGATCCTGACTATCGTAGCACAACTGTCCCAGCTGTGGAAAATTATGGACACATTCCAGCACAGGAGAATAATGTCAGAAATGAAGTATTGACAAATGATGATATTTTGGGAGATCCAATTCCTCCAAACCAGCTGCGTGCGATGCAAGAAGTTTGTTATCAACTGCTCAAGTTGGGCACAGGGGGAAGAGGACGATCACAGTTTCCTGGATCACACCCTGTTTCTCTGAACAGGGACAATCTGCAACTCTTGAGACAACGATATTACTATGCCACATGGAAAGCTGATGGAACACGATATATGATGCTGATTACTTGTGATGGATGTTATTTGATTGACAGAAAATTTATTTTCCAAAGGATCAATATGCGATTTCCTTGCAGATATTCAAATGGGGGTACACCAGAGAGGAATCACCACTACACATTACTTGATGGGGAGATGATTATTGACAGGGATCCACACACACATAAGCAAGAGAGAAGATACCTCATTTATGATTTGATGGCAATCAATAAGGTCTCTTTGACAGAGCTGCCGTTTTATGAAAGGTGGAAATTGCTGGAGAAAGAAGTAATTGAGCCTCGTAACATGGAACGAGAGGGCCTTTCAAAGAATACAAATCCTTATTATAGATATGACTTGGAACCATTTAGTGTGAGAAGGAAGGGCTTTTGGTTACTATCTACTGTATCAAAGCTCCTACATAAATTCATTCCACAACTATCGCATTCATCAGACGGTCTTGTATTCCAGGGTTGGGATGATCCATATGTCCCTCGCACACATGAAGGTCTTCTGAAGTGGAAATACCCTGAGATGAACTCTGTTGATTTCCTCTATGAGGTGGGAGCTGGTGATCGTCCTATGCTTTTTCTGTTTGAACGTGGAAGGAAGAAGTTAATGGAAGAGAATGTTATTTTTAAAGATGCATCAGACATTTCTTCCTATTCCGGAAAGATCATTGAATGCTACTGGGATTCCGGGGAGCGTCATTGGGTCTGTATGCGGACCAGAATAGACAAAGCAACTCCAAATGATATCAATACCTATAGAAAGGTAATGCGAAGCATAAAGGATAACATCACAGAAGAAGTCTTACTGAATGAGATCAATGAGATAATTTGCCTACCTTTGTATGCAGACAGAATACAAAGGGATATCAAGGCTCATCAGCATATGGTCTCTTCAAGGCGCAAGTGA 1842 0.4045 MDRGHERGPYNMNSRPYDRNMVPDGWLDCPAHGQELGRIIPSKVPLGESFNDYIPRETYTPKQAIHQQRVLGRELGLVIDLTNTTRYYPLSDWTKEGIGHVKIRCKGRDAVPDDESVKQFCDEVKDFCSQRTNEKKYILVHCTHGHNRTGYMIVHFLVRTESISVTEAINKFALARHPGIYKQDYIDALYMFYHEKKPEDLVCPQTPEWKRTSDPDYRSTTVPAVENYGHIPAQENNVRNEVLTNDDILGDPIPPNQLRAMQEVCYQLLKLGTGGRGRSQFPGSHPVSLNRDNLQLLRQRYYYATWKADGTRYMMLITCDGCYLIDRKFIFQRINMRFPCRYSNGGTPERNHHYTLLDGEMIIDRDPHTHKQERRYLIYDLMAINKVSLTELPFYERWKLLEKEVIEPRNMEREGLSKNTNPYYRYDLEPFSVRRKGFWLLSTVSKLLHKFIPQLSHSSDGLVFQGWDDPYVPRTHEGLLKWKYPEMNSVDFLYEVGAGDRPMLFLFERGRKKLMEENVIFKDASDISSYSGKIIECYWDSGERHWVCMRTRIDKATPNDINTYRKVMRSIKDNITEEVLLNEINEIICLPLYADRIQRDIKAHQHMVSSRRK* 614
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g02092 613 Gene3D - 482 589 IPR012340 -
Phac1g02092 613 FunFam mRNA capping enzyme family protein 482 590 - -
Phac1g02092 613 CDD Adenylation_mRNA_capping 256 484 IPR001339 GO:0004484|GO:0005524|GO:0006370
Phac1g02092 613 CDD RNA_5'-triphosphatase 25 191 - -
Phac1g02092 613 SUPERFAMILY Nucleic acid-binding proteins 486 598 IPR012340 -
Phac1g02092 613 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 22 211 IPR029021 -
Phac1g02092 613 Gene3D DNA ligase/mRNA capping enzyme 244 481 - -
Phac1g02092 613 SMART dsp_5 54 195 IPR020422 GO:0006470|GO:0008138
Phac1g02092 613 Pfam mRNA capping enzyme, catalytic domain 285 483 IPR001339 GO:0004484|GO:0005524|GO:0006370
Phac1g02092 613 Pfam Dual specificity phosphatase, catalytic domain 74 193 IPR000340 GO:0008138|GO:0016311
Phac1g02092 613 PANTHER MRNA-CAPPING ENZYME 17 594 - -
Phac1g02092 613 PIRSF mRNA_capping_HCE 10 613 IPR017074 GO:0004484|GO:0006370|GO:0140818
Phac1g02092 613 Pfam mRNA capping enzyme, C-terminal domain 518 581 IPR013846 -
Phac1g02092 613 SUPERFAMILY DNA ligase/mRNA capping enzyme, catalytic domain 263 484 - -
Phac1g02092 613 FunFam mRNA capping enzyme family protein 18 228 - -
Phac1g02092 613 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 118 187 IPR000387 GO:0016311|GO:0016791
Phac1g02092 613 ProSitePatterns Tyrosine specific protein phosphatases active site. 140 150 IPR016130 GO:0016311|GO:0016791
Phac1g02092 613 FunFam mRNA capping enzyme, putative 244 481 - -
Phac1g02092 613 Gene3D Protein tyrosine phosphatase superfamily 2 216 IPR029021 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g02092 Phac-Chr1 30874690 30887106 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g02092 11 603 Protein tyrosine phosphatase (PTP) family AT3G09100 64.120 0.0 788
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g02092 K13917 - vra:106758011 1200.27