Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Phac1g02071 | ATGGCCACTCTTCTTCTCAGACACTCCTCTTCCACTTCTCGCCGCCTCTTCCCCTTCGCCTCTCAAATCCACTCTTCCTTCTCTCGTTCTCCTCTCTCTACTCCCAATGACTCCATCACCTCCTCCTCCTCCTATTCTTTCAATTCCAATCCCTGGTGGAGATCCATGGCGACTTTCACCAGAACGAAGCCTCACGTTAATGTCGGAACTATTGGACACGTGGATCACGGGAAGACCACGCTAACCGCGGCAATCACCAAGGTGCTTGCGGATGAAGGGAAGGCTAAGGCTGTGGCCTTTGATGAAATTGACAAGGCTCCTGAAGAGAAGAAGAGAGGAATCACCATTGCAACGGCTCATGTGGAGTATGAGACTGTAAAACGACATTATGCGCATGTGGACTGCCCTGGACACGCGGATTATGTTAAAAATATGATTACGGGAGCTGCTCAGATGGATGGTGGTATACTTGTTGTATCTGCACCTGATGGACCAATGCCTCAAACCAAGGAGCACATTCTTCTTGCTCGCCAAGTTGGTGTGCCATCTCTTGTGTGCTTTCTAAATAAAGTTGATGCTGTTGATGATCCAGAGTTGTTAGAGCTTGTAGAAATGGAGCTACGTGAGCTTCTGAGCTTCTACAAGTTCCCTGGGGATGATATCCCTATCATTAGAGGTTCAGCGTTGTCTGCTTTACAGGGTACAAATGATGAGATTGGAAGACAGGCCATTCTAAAATTAATGGATGCTGTAGATGAATACATTCCTGACCCTGTTCGCCAACTTGACAAGCCTTTCCTAATGCCAATTGAAGATGTGTTCTCAATTCAGGGACGAGGAACAGTTGCCACTGGCCGTGTTGAACAAGGGATCATTAAAGTCGGTGAAGAAGTGGAGGTGTTGGGTCTAATGCAGGGTGGTCCTCTGAAAACAACAGTAACTGGAGTTGAGATGTTCAAGAAGATTTTGGATCAAGGACAAGCTGGTGACAATGTTGGTCTTCTTCTCCGTGGTCTGAAGCGTGAAGATATTCAACGTGGTCAGGTGATTGCCAAGCCAGGTTCTGTAAAAACATACAAGAAATTTGAGGCAGAGATATATGTACTCACAAAGGACGAGGGTGGCCGACACACCGCTTTCTTCTCTAACTACAGACCTCAGTTTTACTTGAGGACCGCTGATATCACTGGAAAAGTAGAGTTGCCTGAAAATGTTAAGATGGTTATGCCTGGAGACAACGTTACAGCTGTGTTTGAATTGATTTCACCAGTTCCACTTGATGCAGGACAAAGATTTGCATTGAGAGAAGGCGGCAGAACAGTTGGTGCAGGTGTGGTGTCAAAAGTACTGAGCTAG | 1356 | 0.4653 | MATLLLRHSSSTSRRLFPFASQIHSSFSRSPLSTPNDSITSSSSYSFNSNPWWRSMATFTRTKPHVNVGTIGHVDHGKTTLTAAITKVLADEGKAKAVAFDEIDKAPEEKKRGITIATAHVEYETVKRHYAHVDCPGHADYVKNMITGAAQMDGGILVVSAPDGPMPQTKEHILLARQVGVPSLVCFLNKVDAVDDPELLELVEMELRELLSFYKFPGDDIPIIRGSALSALQGTNDEIGRQAILKLMDAVDEYIPDPVRQLDKPFLMPIEDVFSIQGRGTVATGRVEQGIIKVGEEVEVLGLMQGGPLKTTVTGVEMFKKILDQGQAGDNVGLLLRGLKREDIQRGQVIAKPGSVKTYKKFEAEIYVLTKDEGGRHTAFFSNYRPQFYLRTADITGKVELPENVKMVMPGDNVTAVFELISPVPLDAGQRFALREGGRTVGAGVVSKVLS* | 452 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Phac1g02071 | 451 | Gene3D | Translation factors | 261 | 391 | - | - | |
Phac1g02071 | 451 | PANTHER | ELONGATION FACTOR TU-RELATED | 58 | 450 | - | - | |
Phac1g02071 | 451 | Pfam | Elongation factor Tu domain 2 | 280 | 350 | IPR004161 | GO:0005525 | |
Phac1g02071 | 451 | FunFam | Elongation factor Tu | 54 | 258 | - | - | |
Phac1g02071 | 451 | ProSiteProfiles | Translational (tr)-type guanine nucleotide-binding (G) domain profile. | 63 | 259 | IPR000795 | GO:0003924|GO:0005525 | |
Phac1g02071 | 451 | CDD | EF_Tu | 64 | 258 | IPR041709 | - | |
Phac1g02071 | 451 | PRINTS | GTP-binding elongation factor signature | 67 | 80 | IPR000795 | GO:0003924|GO:0005525 | |
Phac1g02071 | 451 | PRINTS | GTP-binding elongation factor signature | 131 | 141 | IPR000795 | GO:0003924|GO:0005525 | |
Phac1g02071 | 451 | PRINTS | GTP-binding elongation factor signature | 111 | 119 | IPR000795 | GO:0003924|GO:0005525 | |
Phac1g02071 | 451 | PRINTS | GTP-binding elongation factor signature | 147 | 158 | IPR000795 | GO:0003924|GO:0005525 | |
Phac1g02071 | 451 | PRINTS | GTP-binding elongation factor signature | 184 | 193 | IPR000795 | GO:0003924|GO:0005525 | |
Phac1g02071 | 451 | Gene3D | - | 55 | 258 | IPR027417 | - | |
Phac1g02071 | 451 | Gene3D | Translation factors | 395 | 450 | - | - | |
Phac1g02071 | 451 | CDD | EFTU_II | 266 | 354 | IPR033720 | - | |
Phac1g02071 | 451 | MobiDBLite | consensus disorder prediction | 26 | 45 | - | - | |
Phac1g02071 | 451 | Hamap | Elongation factor Tu [tuf]. | 54 | 451 | IPR004541 | GO:0003746|GO:0005525|GO:0006414 | |
Phac1g02071 | 451 | CDD | EFTU_III | 357 | 446 | - | - | |
Phac1g02071 | 451 | NCBIfam | elongation factor Tu | 55 | 450 | IPR004541 | GO:0003746|GO:0005525|GO:0006414 | |
Phac1g02071 | 451 | Pfam | Elongation factor Tu C-terminal domain | 355 | 449 | IPR004160 | - | |
Phac1g02071 | 451 | FunFam | Elongation factor Tu | 261 | 391 | - | - | |
Phac1g02071 | 451 | SUPERFAMILY | EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain | 360 | 450 | IPR009001 | - | |
Phac1g02071 | 451 | Pfam | Elongation factor Tu GTP binding domain | 63 | 256 | IPR000795 | GO:0003924|GO:0005525 | |
Phac1g02071 | 451 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 61 | 281 | IPR027417 | - | |
Phac1g02071 | 451 | ProSitePatterns | Translational (tr)-type guanine nucleotide-binding (G) domain signature. | 104 | 119 | IPR031157 | - | |
Phac1g02071 | 451 | SUPERFAMILY | Translation proteins | 260 | 356 | IPR009000 | - | |
Phac1g02071 | 451 | NCBIfam | small GTP-binding protein domain | 66 | 202 | IPR005225 | GO:0005525 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Phac1g02071 | Phac-Chr1 | 30731943 | 30736132 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Phac1g02071 | 61 | 449 | Eukaryotic Initiation Factors Gene Family | AT5G60390 | 30.275 | 1.80e-45 | 162 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Phac1g02071 | K02358 | - | gmx:100776891 | 806.594 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Phac1g02071 | 1 | 30731943 | 30736132 | Phac1g02071 | 1 | 30731943 | 30736132 | ECH |