Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g02056 ATGCCACTATTCCCGATCCTTGTCACCATCTTCCTCACTCTCCCTGCCCTTTCCCTCTCCGTTCCCTGTCCTCTCAACATCACCCTCTTCCGTTCCAGACCCTCCTCCGACCCCAAGACACGGTGCCGTTACATCCTCCAATCCCTGCGTATTCTTCAATCCGATTTTCTCCGCCGCACCGGTTTCTTCCCTCCTTCCAACGCCTCCTTCTCTTGCTGGAACACTCTCCAATCTCACACCCACCAATACGACATTCGCTCCTCCTGTAACCTCTCTTCCTCTTCCATTTCCCTCTCCTGCAACAACATCTCCACCCGATCCCAATTCCAGGACTCTCTTCCTCTCTCAGCTCTTAAACCCGTCTGGAATACTTGTAACCAATCTCTCAACAGTGCCGCATCTTGTACTCTCTGCACCAACGCTTTGTCCAACTTGGATTCCCACATCACCGACAATACCACTGATTGCAAGAGTATTGCTTCTATCTATGCTGCTTCCTTCTCCGACCTGCAAGACCCTGGAACTGCTGAGTGTTTGTTCAGCCTTGGCTTTTCTACTTCGGTTTCCACTGGTAAGCGTCGAACCATTCTTATTGTGGTTTTTTGTGTGCTGGCCTTCTTCTTGTTGCTTTTCTTTGGTGTTCTTTGGGCTTACTTTAGATTGAAGCAGAAAAAGGATATTTGTAAAACTGAGATGGATTTGGGTTCTGGGTTGGATTCTATGAACCATAGTACTACTTTGATCAGGTTCACCTTTGATGATATTAAAAAGGCTACTAGGAATTTCGCCTGTGATAACATAATTGGGAAGGGAGCTTATGGGAATGTTTATAGAGGGATGTTGTTTGATGGTACTCAGGTTGCATTGAAAAGATTTAAGAATTGTTCTGTTGCTGGGGATGCTAGCTTCACTCATGAAGTTGAGGTTATTGCGAGCGTTAGGCATGTGAACCTTGTTACCTTGAGAGGGTATTGTACTGCTACAACTAATTTAGAGGGTCACCAGAGGATTATCGTAACTGATTTGATGGAGAATGGGAGCGTTTATGATCATTTATTTGGTTCTGCTAAGCAGAAACTGAGTTGGCCAATTCGTCAAAAGATTGCTCTAGGCACTGCTAGGGGGTTGGCTTATTTGCACTATGGGGCTCAACCTTCCATCATCCATAGGGATATTAAAGCTAGTAACATACTTCTGGACAGTAAGTTTGAAGCCAAGGTAGCGGATTTTGGATTAGCGAAGTTCAACCCTGAGGAAATGACGCATATGAGCACTAGAGTGGTTGGAACCATGGGGTATGTGGCACCTGAGTATGCTTTGTATGGACAGTTGACAGAGAGAAGTGATGTGTTCAGTTTTGGGGTTGTTCTTCTTGAGCTTTTGAGTGGGAGAAGGGCTCTTCAAATTGACACTGATGGGCAACCCTCTGCAATCACTGACTTTGCTTGGTCTTTGGTTAGGAATGGTAAAGCTTTGGACGTTATTGAAGATGATATGCCAGAACTTGGTCCAACAGAAATTGTTGAGAAGTATGTACTGGTTGCTGTACTATGTTGTCATCCACAACTACATGGTAGGCCAACAATGGACCAGGTTGTTAAAATGCTAGAGACGGAGGAATCAGTGTCCTCATTAATTCAACACCCAATGTCTTGTATTGCTGGGAGGATTGATACTGAGAAATCTGTGTAG 1692 0.4504 MPLFPILVTIFLTLPALSLSVPCPLNITLFRSRPSSDPKTRCRYILQSLRILQSDFLRRTGFFPPSNASFSCWNTLQSHTHQYDIRSSCNLSSSSISLSCNNISTRSQFQDSLPLSALKPVWNTCNQSLNSAASCTLCTNALSNLDSHITDNTTDCKSIASIYAASFSDLQDPGTAECLFSLGFSTSVSTGKRRTILIVVFCVLAFFLLLFFGVLWAYFRLKQKKDICKTEMDLGSGLDSMNHSTTLIRFTFDDIKKATRNFACDNIIGKGAYGNVYRGMLFDGTQVALKRFKNCSVAGDASFTHEVEVIASVRHVNLVTLRGYCTATTNLEGHQRIIVTDLMENGSVYDHLFGSAKQKLSWPIRQKIALGTARGLAYLHYGAQPSIIHRDIKASNILLDSKFEAKVADFGLAKFNPEEMTHMSTRVVGTMGYVAPEYALYGQLTERSDVFSFGVVLLELLSGRRALQIDTDGQPSAITDFAWSLVRNGKALDVIEDDMPELGPTEIVEKYVLVAVLCCHPQLHGRPTMDQVVKMLETEESVSSLIQHPMSCIAGRIDTEKSV* 564
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g02056 563 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 53 549 - -
Phac1g02056 563 SUPERFAMILY Protein kinase-like (PK-like) 238 537 IPR011009 -
Phac1g02056 563 Pfam Protein tyrosine and serine/threonine kinase 265 536 IPR001245 GO:0004672|GO:0006468
Phac1g02056 563 ProSitePatterns Protein kinases ATP-binding region signature. 268 290 IPR017441 GO:0005524
Phac1g02056 563 ProSitePatterns Serine/Threonine protein kinases active-site signature. 387 399 IPR008271 GO:0004672|GO:0006468
Phac1g02056 563 Gene3D Transferase(Phosphotransferase) domain 1 343 550 - -
Phac1g02056 563 ProSiteProfiles Protein kinase domain profile. 262 551 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac1g02056 563 FunFam probable LRR receptor-like serine/threonine-protein kinase RKF3 222 341 - -
Phac1g02056 563 Pfam SPARK 21 153 IPR043891 -
Phac1g02056 563 Gene3D Phosphorylase Kinase; domain 1 227 341 - -
Phac1g02056 563 SMART serkin_6 262 551 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac1g02056 563 FunFam probable LRR receptor-like serine/threonine-protein kinase RKF3 343 544 - -
Phac1g02056 563 CDD STKc_IRAK 268 537 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g02056 Phac-Chr1 30559677 30562027 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g02056 23 561 Receptor kinase-like Gene Family AT2G48010 57.424 0.0 644
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RKF3 Phac1g02056 PK_Tyr_Ser-Thr 7.1e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g02056 - - vun:114194863 925.235