Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g02055 ATGTCCCTTCCCTTTTATTTCTCCCTCTTTTTTATTTTTTCTTTTTCATTTATTCTTCCGCTTCCTAATCTGGCCGCCAACGACACCGTTCCCTGTCCCCTCAACATCACCGTGCTCCGCGTCGTGGGCGGCGGCGCCCGTCCCTCCTTCGACTCCGGCACGCAGTGCCATTACATCCTGCAGGCCCTGCACCTCCTCCAGGCGGACTACCTCCGCCGCAGCAACCTCTTCGTGCCGCCGCTCAACGCCTCCGAGTCCTGCTGGACCTCCTTCCAGTCCTTCATCAACGAATTCGATTCGAGCATCGATATCCGCTCCTCCTGCGGCCTCAAAACCGAGTGGATCTCCCAAGGCTGCATGAACATCACCACCAAACAGAAGTTCGAAGCCACCGTCCCCTCCGCCGCAATCCAGGATGTCCAAGGCAACTGCAACCAGTCCCTCGAAAACAACGCCCCCTGCGCCCTCTGCACCACCAAACTCGCCAGCCTTCTCTCCTCCTTGACCGGCCCAACCGTCGGAAACGTCACCGATTGCCGAGCCTATACCTCGATCTACGCCGCTTCTCTCTCTGAGCAGTATGGTGCCACTGACCCAGGAACCGCCAAGTGTCTCTTCGGCCTCGATTTTTCCTCCTCCAGTTCCAGCAGCAAGCGCCGAACCATTGTTATCGTGGTTTCCGTTTTCTGTTTTGTGGCTTTGCTTGTTTTTGCTGGGCTTTGGACTTACCTTAGATTGAAGAGGAGGAACGAGTTTGCGGGAGAGAAGGGTGTTGGAACATCTGAGCTTGGTTTGGGTTCTGGGTTGGATTCCATGAACCAGAGTACCACTTTGATTAGGTTCAGTTTTGATGAGATTAAAAAGGCTACTAGGAACTTCTCGAGGGATAACATGATCGGGAGTGGGGGTTATGGGAATGTTTATAAAGGGATGTTGCCAGATGGTAGTCCAGTTGCTTTTAAAAGGTTCAAGAATTGTTCTGTTGCCGGGGATAATAGCTTCACTCACGAAGTTGAGGTTATAGCGAGTGTTCGCCATGTGAATCTTGTTACCTTAAGAGGTTATTGTACTGCCACGACCAACTTAGAGGGGCACCAGAGGATTATTGTGACTGATTTGATGGAAAATGGGAGTCTTTATGATCATTTATTTGGTTCTTCTAAGAAAAATCTGAGTTGGCCTATTCGTCAGAAGATTGCTCTCGGGACTGCTAGAGGGTTGGCTTATTTGCATTATGGGGCTCAACCTTCCATCATTCATAGGGATATTAAAGCTAGTAACATACTTCTGGACCATAAGTTTGAAGCCAAGGTGGCGGATTTCGGGTTGGCCAAGTTCAACCCTGAGGGAATGACGCATATGAGCACTAGAGTGGCTGGGACTATGGGGTATGTTGCTCCTGAGTATGCCTTGTATGGACAGTTGACAGAGAGAAGTGATGTGTTCAGTTATGGTGTTGTGCTTCTTGAGCTTTTGAGTGGGAAAAAGGCTCTTCAAACCAACGATGATGGGCAACCCTCCGCACTCACTGACTTAGCTTGGTCGTTGGTTAGAAACGGTAGTGCTTTGGATGTAGTTGAAGATGGCATTCCAGACCCTGGTCCACCAGAAGTTCTCGAGAAGTACGTGTTGATTGCTGTCTTGTGTTCTCATCCACAGCTATATGCTAGGCCAACAATGGATCAGGTTGTTAAAATGCTGGAGACAGATGAATCGGTTCCCTCCTTAATGGAAAGGCCAATTCCTTTTATTGCTGGGAGGATTGACATTGAGAAATCTGCGCTGAGTAACTCGGGTCAGCTCTGCAGTCCAACCGGTTATCAAGCATATACATTACAAGGTCGCCGCAGATCTATTTCTAAAGAAGAGGAAGAAGAAGAAGAAGGAAGTTCAGTGGCTGATACTGTTACCACAGAATGA 1920 0.4927 MSLPFYFSLFFIFSFSFILPLPNLAANDTVPCPLNITVLRVVGGGARPSFDSGTQCHYILQALHLLQADYLRRSNLFVPPLNASESCWTSFQSFINEFDSSIDIRSSCGLKTEWISQGCMNITTKQKFEATVPSAAIQDVQGNCNQSLENNAPCALCTTKLASLLSSLTGPTVGNVTDCRAYTSIYAASLSEQYGATDPGTAKCLFGLDFSSSSSSSKRRTIVIVVSVFCFVALLVFAGLWTYLRLKRRNEFAGEKGVGTSELGLGSGLDSMNQSTTLIRFSFDEIKKATRNFSRDNMIGSGGYGNVYKGMLPDGSPVAFKRFKNCSVAGDNSFTHEVEVIASVRHVNLVTLRGYCTATTNLEGHQRIIVTDLMENGSLYDHLFGSSKKNLSWPIRQKIALGTARGLAYLHYGAQPSIIHRDIKASNILLDHKFEAKVADFGLAKFNPEGMTHMSTRVAGTMGYVAPEYALYGQLTERSDVFSYGVVLLELLSGKKALQTNDDGQPSALTDLAWSLVRNGSALDVVEDGIPDPGPPEVLEKYVLIAVLCSHPQLYARPTMDQVVKMLETDESVPSLMERPIPFIAGRIDIEKSALSNSGQLCSPTGYQAYTLQGRRRSISKEEEEEEEGSSVADTVTTE* 640
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g02055 639 CDD STKc_IRAK 299 568 - -
Phac1g02055 639 Pfam Protein kinase domain 294 511 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac1g02055 639 Pfam SPARK 28 177 IPR043891 -
Phac1g02055 639 MobiDBLite consensus disorder prediction 613 639 - -
Phac1g02055 639 ProSiteProfiles Protein kinase domain profile. 293 584 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac1g02055 639 SMART serkin_6 293 584 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac1g02055 639 FunFam probable LRR receptor-like serine/threonine-protein kinase RKF3 374 575 - -
Phac1g02055 639 FunFam probable LRR receptor-like serine/threonine-protein kinase RKF3 256 372 - -
Phac1g02055 639 SUPERFAMILY Protein kinase-like (PK-like) 275 580 IPR011009 -
Phac1g02055 639 ProSitePatterns Protein kinases ATP-binding region signature. 299 321 IPR017441 GO:0005524
Phac1g02055 639 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 73 616 - -
Phac1g02055 639 ProSitePatterns Serine/Threonine protein kinases active-site signature. 418 430 IPR008271 GO:0004672|GO:0006468
Phac1g02055 639 Gene3D Phosphorylase Kinase; domain 1 267 372 - -
Phac1g02055 639 Gene3D Transferase(Phosphotransferase) domain 1 374 577 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g02055 Phac-Chr1 30515350 30517968 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g02055 9 614 Receptor kinase-like Gene Family AT2G48010 60.784 0.0 741
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RKF3 Phac1g02055 Pkinase 1.1e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g02055 - - gmx:100819453 1056.2