Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g02054 ATGGAGGACGAGGTGGATTCCCCTGTTGGTGTTCTTGAGGATTATTTTTTCAAGAGTTCAGAATCAGAAAGTAGTTCTTCCAAAGAACCTGGTACTACTACGGATTCTGATAAGTCAAAGCCCGGTTCTAGGTGGCATGCGTTTCTTCAACTGTTGAGGGTCAAATCGAAGAAGCCAGTAGCCACATTGTATCCTCTCAGTGTCCTCAAGCTCTCCAGAAGATTGAGCAGTGGCATGAGGGAGATTGTCATAGATGCAGATTCGTCCTTGCATAGGTCCCCCTGGGAGATCTTCACTCACCAAGAGATACAAATTGCAACCAATCACTTCGCCCAAGAAAATTGTATTGGAAAAGGTGGTTATGCTGAGGTTTACAAAGGGTGTTTACCAAATGGTCAGCTGGTGGCGATTAAACGATTGACACGTGGAGAAGGAAATGAAACTATAGGGGACTTCTTATCAGAACTTGGCATAATGGCTCATGTAAACCATCCCAGTACTGCTAAATTAGTTGGCTATGGAGTTGAGGGAGGAATGCATTTAGTGCTTGAGTTGTCTAAAAAAGGGTGCTTAGCTTCAGTGCTGAATGGTTCCAAGGAGAAGCTACCATGGTCAGTTAGGCAGAAAGTAGCATTAGGAACAGCCAAGGGTATATTGTACCTTCATGAAGGTTGTCCAAGAAGAATTATACACAGAGATATAAAAGCATCAAATATCTTGCTCACTGAGGACTATGAGCCGCAGATTTGTGATTTCGGGCTAGCAAAATGGCTACCAGAGAATTGGACCCATCACACCGTCTCAAAAATTGAAGGGACTTTTGGTTACCTTGCTCCAGAATACTTGCTTCATGGGATAGTGGATGAGAAAACAGATATTTTTGCCTTTGGTGTAGTGCTATTAGAATTAGTCACTGGGCGTAGAGCAATTGATTATTCACAACAAAGCCTTGTTTTGTGGGCAGAACCTTTTCTGAAAAAGAATAATATTAGGGAGCTGATTGATCCTTCACTTGCTGGCGATTTTGACTGTCGGCAGATTAAAATTATGCTCTTGACAGCTTCTTTATGCATTCAACAATCCTCCATTCGTCGCCCCTCTATGAACCAGGTTCTACAGCTTCTGAATGGTAACTGCTCTAGGTTCACGAAGAAATCTCAACTTCCATTCTTTCGTAAAGACTTTCAGGAAGAGTTCATTGATTCTGATTAA 1212 0.4233 MEDEVDSPVGVLEDYFFKSSESESSSSKEPGTTTDSDKSKPGSRWHAFLQLLRVKSKKPVATLYPLSVLKLSRRLSSGMREIVIDADSSLHRSPWEIFTHQEIQIATNHFAQENCIGKGGYAEVYKGCLPNGQLVAIKRLTRGEGNETIGDFLSELGIMAHVNHPSTAKLVGYGVEGGMHLVLELSKKGCLASVLNGSKEKLPWSVRQKVALGTAKGILYLHEGCPRRIIHRDIKASNILLTEDYEPQICDFGLAKWLPENWTHHTVSKIEGTFGYLAPEYLLHGIVDEKTDIFAFGVVLLELVTGRRAIDYSQQSLVLWAEPFLKKNNIRELIDPSLAGDFDCRQIKIMLLTASLCIQQSSIRRPSMNQVLQLLNGNCSRFTKKSQLPFFRKDFQEEFIDSD* 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g02054 403 PANTHER OS08G0249100 PROTEIN 6 398 IPR046958 -
Phac1g02054 403 SUPERFAMILY Protein kinase-like (PK-like) 90 375 IPR011009 -
Phac1g02054 403 Pfam Protein kinase domain 112 372 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac1g02054 403 ProSiteProfiles Protein kinase domain profile. 110 391 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac1g02054 403 MobiDBLite consensus disorder prediction 18 32 - -
Phac1g02054 403 FunFam receptor-like cytosolic serine/threonine-protein kinase RBK2 187 388 - -
Phac1g02054 403 ProSitePatterns Serine/Threonine protein kinases active-site signature. 229 241 IPR008271 GO:0004672|GO:0006468
Phac1g02054 403 FunFam Receptor-like cytosolic serine/threonine-protein kinase RBK2 80 184 - -
Phac1g02054 403 MobiDBLite consensus disorder prediction 16 42 - -
Phac1g02054 403 SMART serkin_6 110 383 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac1g02054 403 ProSitePatterns Protein kinases ATP-binding region signature. 116 138 IPR017441 GO:0005524
Phac1g02054 403 Gene3D Transferase(Phosphotransferase) domain 1 187 392 - -
Phac1g02054 403 Gene3D Phosphorylase Kinase; domain 1 81 184 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g02054 Phac-Chr1 30494075 30497259 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g02054 98 377 Receptor kinase-like Gene Family AT1G53420 41.724 8.73e-68 229
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Phac1g02054 Pkinase 2.2e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g02054 - - gmx:100818913 681.789