Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g02053 ATGGAGGACGAGGTGGATTCCCCTGTTGGTGTTCTTGAGGATTATTTTTTCAAGAGTTCAGAATCAGAAAGTAGTTCTTCCAAAGAACCTGGTACTACTACGGATTCTGATAAGTCAAAGCCCGGTTCTAGGTGGCATGCGTTTCTTCAACTGTTGAGGGTCAAATCGAAGAAGCCAGTAGCCACATTGTATCCTCTCAGTGTCCTCAAGCTCTCCAGAAGATTGAGCAGTGGCATGAGGGAGATTGTCATAGATGCAGATTCGTCCTTGCATAGGTCCCCCTGGGAGATCTTCACTCACCAAGAGATACAAATTGCAACCAATCACTTCGCCCAAGAAAATTGTATTGGAAAAGGTGGTTATGCTGAGGTTTACAAAGGGTGTTTACCAAATGGTCAGCTGGTGGCGATTAAACGATTGACACGTGGAGAAGGAAATGAAACTATAGGGGACTTCTTATCAGAACTTGGCATAATGGCTCATGTAAACCATCCCAGTACTGCTAAATTAGTTGGCTATGGAGTTGAGGGAGGAATGCATTTAGTGCTTGAGTTGTCTAAAAAAGGGTGCTTAGCTTCAGTGCTGAATGGTTCCAAGGAGAAGCTACCATGGTCAGTTAGGCAGAAAGTAGCATTAGGAACAGCCAAGGGTATATTGTACCTTCATGAAGGTTGTCCAAGAAGAATTATACACAGAGATATAAAAGCATCAAATATCTTGCTCACTGAGGACTATGAGCCGCAGATTTGTGATTTCGGGCTAGCAAAATGGCTACCAGAGAATTGGACCCATCACACCGTCTCAAAAATTGAAGGGACTTTTGGTTACCTTGCTCCAGAATACTTGCTTCATGGGATAGTGGATGAGAAAACAGATATTTTTGCCTTTGGTGTAGTGCTATTAGAATTAGTCACTGGGCGTAGAGCAATTGATTATTCACAACAAAGCCTTGTTTTGTGGGCAGAACCTTTTCTGAAAAAGAATAATATTAGGGAGCTGATTGATCCTTCACTTGCTGGCGATTTTGACTGTCGGCAGATTAAAATTATGCTCTTGACAGCTTCTTTATGCATTCAACAATCCTCCATTCGTCGCCCCTCTATGAACCAGGCACGTGCTCTTGTTCTTCTCAAATTTCAACACAACAATCTTTTCATCTTCAAATTTGCCTTCTTATATTCTAACTATGACATGCGAATAACCGTTTCACCCTGTTTTCCTTCATGA 1227 0.4214 MEDEVDSPVGVLEDYFFKSSESESSSSKEPGTTTDSDKSKPGSRWHAFLQLLRVKSKKPVATLYPLSVLKLSRRLSSGMREIVIDADSSLHRSPWEIFTHQEIQIATNHFAQENCIGKGGYAEVYKGCLPNGQLVAIKRLTRGEGNETIGDFLSELGIMAHVNHPSTAKLVGYGVEGGMHLVLELSKKGCLASVLNGSKEKLPWSVRQKVALGTAKGILYLHEGCPRRIIHRDIKASNILLTEDYEPQICDFGLAKWLPENWTHHTVSKIEGTFGYLAPEYLLHGIVDEKTDIFAFGVVLLELVTGRRAIDYSQQSLVLWAEPFLKKNNIRELIDPSLAGDFDCRQIKIMLLTASLCIQQSSIRRPSMNQARALVLLKFQHNNLFIFKFAFLYSNYDMRITVSPCFPS* 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g02053 408 PANTHER OS08G0249100 PROTEIN 6 374 IPR046958 -
Phac1g02053 408 MobiDBLite consensus disorder prediction 18 32 - -
Phac1g02053 408 ProSitePatterns Serine/Threonine protein kinases active-site signature. 229 241 IPR008271 GO:0004672|GO:0006468
Phac1g02053 408 Gene3D Transferase(Phosphotransferase) domain 1 187 384 - -
Phac1g02053 408 SUPERFAMILY Protein kinase-like (PK-like) 90 374 IPR011009 -
Phac1g02053 408 MobiDBLite consensus disorder prediction 16 42 - -
Phac1g02053 408 FunFam Receptor-like cytosolic serine/threonine-protein kinase RBK2 80 184 - -
Phac1g02053 408 FunFam receptor-like cytosolic serine/threonine-protein kinase RBK2 187 388 - -
Phac1g02053 408 Pfam Protein kinase domain 112 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac1g02053 408 SMART serkin_6 110 377 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac1g02053 408 Gene3D Phosphorylase Kinase; domain 1 81 184 - -
Phac1g02053 408 ProSiteProfiles Protein kinase domain profile. 110 384 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac1g02053 408 ProSitePatterns Protein kinases ATP-binding region signature. 116 138 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g02053 Phac-Chr1 30494075 30497259 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g02053 97 377 Trihelix Transcription Factor Family AT1G68690 40.000 2.33e-67 224
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Phac1g02053 Pkinase 4.9e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g02053 - - gmx:100818913 641.728