Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g02025 ATGACAGTGTTGGGGCTGGGTCCCAGAGATCGGTTGTGCCGGTACTTTGAGAAGCCGAAGCCATTTTCAGATTTTGTGGCATTGTCAGGGTTGAGTGAGAGATGCAACAGCCGCCCCAAAGTAGTCCATATATCAGACCCCACTCTCCTTCCACCCCTTCAAGACCATTCCTCTTCTCATTTTCTCTTCTCTTCATCACATCAATTTTTCCCTTTGCCTAACATGAACAACACCCCCACCCCCACCCCCACCCCCACCCACGACTTCATGAACGTCGACTCTTTCTCTCAGCTCCCCTTTCTCCGCCCCTCCCCTCCCTCCAAAGATAAACCCATTCGCCTCTTCGGCCAAGACTTCTCCCAAACCACCCACACCCTCACCAACAACCACCACGCTAACCACAACACCACCAACTCACAAAACGCCGAGCCCTCCCGCAGATTCGAGTGCCATTACTGTTGCAGAAACTTCCCCACTTCCCAGGCCTTAGGCGGCCACCAAAACGCCCACAAACGAGAGCGCCAACACGCCAAACGACACCTCCACTCAACCATGCTCCAATCCACCCTCTCCGATCCTACCACCTACGCTTTCACCAACCCCACCTTCACTTCCTCCGCAATCTCTTATTCTTCTCACCCAACTTGGGATTCTAGCGCTGCTCGCGGAAGGTTCTACGGAAGCTCCCATTCTCACCAGCTTCAACCCATCAACGGAAGCCCCTTGGGCTTGTGGCGAATCCCCAACGCCACTGCAACCACTCACGCCCAGAGTAACCCTATTTTATACCACCAACGCCCGTCGCCTTTGCTTGCTGGCCAGGACATGGTGACCACGAGGATGGGTCCCTCACCCTCCGGCTCGCAGAACCGGTTTGGTTATGACCTCAAACCCAGCGTAAACGACCATGTGAGTTTGGATCTTCATCTGTAA 933 0.5445 MTVLGLGPRDRLCRYFEKPKPFSDFVALSGLSERCNSRPKVVHISDPTLLPPLQDHSSSHFLFSSSHQFFPLPNMNNTPTPTPTPTHDFMNVDSFSQLPFLRPSPPSKDKPIRLFGQDFSQTTHTLTNNHHANHNTTNSQNAEPSRRFECHYCCRNFPTSQALGGHQNAHKRERQHAKRHLHSTMLQSTLSDPTTYAFTNPTFTSSAISYSSHPTWDSSAARGRFYGSSHSHQLQPINGSPLGLWRIPNATATTHAQSNPILYHQRPSPLLAGQDMVTTRMGPSPSGSQNRFGYDLKPSVNDHVSLDLHL* 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g02025 310 ProSitePatterns Zinc finger C2H2 type domain signature. 150 170 IPR013087 -
Phac1g02025 310 PANTHER ZINC FINGER PROTEIN GIS 83 310 IPR044291 GO:0003700|GO:0009739|GO:0010026|GO:0010090
Phac1g02025 310 SUPERFAMILY beta-beta-alpha zinc fingers 145 176 IPR036236 -
Phac1g02025 310 ProSiteProfiles Zinc finger C2H2 type domain profile. 148 175 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g02025 Phac-Chr1 30047609 30049028 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g02025 84 310 C2H2 Transcription Factor Family AT3G58070 38.783 1.81e-42 145
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g02025 - - pvu:PHAVU_001G144900g 449.514