Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g01999 ATGGAAGAGGTACCGGTGAGAACGCTTGATGACACGGACGACGGTGCTGCAGTCTCATCCCCCAACAGTGCAGTATCGTCATTTCAGATGGCTTTTTGCAGAAACAATAGAAAGTTTTCTGAGGGTGACAGCGAAGAAGACGAAAATGGCACAGCAAGGAAAAAACTCAGACTCTCCAAAACACAATCAGCTTTCCTGGAAGACAGCTTCAAAGAACACACCACTCTCAATCCCAAACAAAAACTTGTTCTTGCAAAAGAGTTAAATCTCCGTCCCCGTCAAGTGGAGGTTTGGTTTCAGAACAGAAGGGCAAGAACAAAGTTGAAGCAGACAGAGGTGGATTGTGAGTACTTGAAGAGGTGTTGTGAGAGTCTGACAGAAGAGAATAAGAGGTTACAGAAGGAACTGCAGGAACTGAGGGCTTTGAAAACTTGTGAACCGTTTTTCAAGCAGCTTCCGGCTACCACCCTCACCATGTGTCCCTCCTGTGAACGCGTCGCCACCACCACCTCCACCTCCGCCGCCGCCACCAACAATGGTGGTGTTTCTCGGGACAAGCCCAGAATATTGTCAAGCCCACCCGCAGCAGGCCCACATGGCCCATCAGATTGCTTCTTCATCTGA 624 0.492 MEEVPVRTLDDTDDGAAVSSPNSAVSSFQMAFCRNNRKFSEGDSEEDENGTARKKLRLSKTQSAFLEDSFKEHTTLNPKQKLVLAKELNLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCESLTEENKRLQKELQELRALKTCEPFFKQLPATTLTMCPSCERVATTTSTSAAATNNGGVSRDKPRILSSPPAAGPHGPSDCFFI* 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g01999 207 ProSitePatterns 'Homeobox' domain signature. 84 107 IPR017970 GO:0000981|GO:0006355
Phac1g01999 207 ProSiteProfiles 'Homeobox' domain profile. 49 109 IPR001356 GO:0003677
Phac1g01999 207 Gene3D - 57 107 - -
Phac1g01999 207 SMART halz 109 152 IPR003106 GO:0006355|GO:0043565
Phac1g01999 207 CDD homeodomain 53 110 IPR001356 GO:0003677
Phac1g01999 207 Coils Coil 115 142 - -
Phac1g01999 207 MobiDBLite consensus disorder prediction 1 24 - -
Phac1g01999 207 SMART HOX_1 51 113 IPR001356 GO:0003677
Phac1g01999 207 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN HAT14 13 179 - -
Phac1g01999 207 Pfam Homeobox associated leucine zipper 109 143 IPR003106 GO:0006355|GO:0043565
Phac1g01999 207 FunFam Homeobox-leucine zipper protein HAT22 57 103 - -
Phac1g01999 207 MobiDBLite consensus disorder prediction 171 202 - -
Phac1g01999 207 Pfam Homeodomain 53 107 IPR001356 GO:0003677
Phac1g01999 207 SUPERFAMILY Homeodomain-like 45 110 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g01999 Phac-Chr1 29803556 29805395 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g01999 43 166 Homeobox Transcription Factor Family AT4G37790 74.400 1.14e-64 199
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Phac1g01999 Homeodomain 7e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g01999 K09338 - gmx:100784703 307.375