Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g01980 ATGTGGATGTTTTCGTGGATTTCAAATATAGTTTTTTCGTGCTTCAACTCTTTGAGGCACTATGCTCGAATGGAGAGTGATGATGAAGATGAGTCTTCGTCCATTGGAAACTCGCTTCTGTGGCGTAGAGACCTTCAGAGGCATTCTTGTGGTGAATTCTCCTTTGCTGTGTGCCAGGCAAATGGAGAAATTGAAGACTATAGCCAAGTTGAAATTGGCTCTAATGTCCTCTTTGTTGGGATTTATGATGGTCATGGTGGTCCTGAAGCTTCACGGTTCATTAGAAATCGCATCTTCCAACACATAATAAGGATTGCTCGGGAAAGTAGAACTCTTTGTGAAGGAACTCTGAGACAAGCTATTTCTGCTACAGAGGATGACTTTATGACTATTGTTAGCAGGAGTTATGGGTTAGATGCTTCAATGGCGCGAGTTGGTTCCTGTGTTCTGATTGGTTTGATCTGGAGAGGGATTCTATATATCGCCAATCTGGGAGACTCCCGTGCCGTAGTTGGTTGTGCAGGTAGATGTAACTCCATCATTGCTGAACAGTTGACTAGAGACCACAATGTCAGTGGGGAGGACATTAGACAAGAACTTAGGGCTTTGCATCCAAATGATCCAGATATTGTAGTCATGAGTCGTGGAGCATGGCGTGTTAAAGGCATCATCCAGGTATCCAGAACCATAGGAGATGCATATCTGAAGAGGCCACCATTCTCTCTCGATCCAACATTCCCTAATCTCTTGAGTGAACCTCTCACTGAACCTGTGCTGTCTGCAGAACCATCTCTATTTTCAAGAATTTTGCAACCCAATGACAAATTTCTTATATTTGCATCCGATGGACTTTGGGATCACTTGTCAAATGAGAAAGCAGCTGAAATTGTTCATCGTTATCCACGAAATGGGATTGCAAGAAGACTTATTAAGACTGCATTAAAGGAGGCGGCTAGAAAAGCGGGGATGGAATATCGCCAGCTTCAGAACATCGAGAAGGGGAGCAGACGGGTTTTTCATGATGACATTACTGTGATTGTTATCTTCTTACGCCAAGAAGCAGATGTTAATGTGCCAGAGTTGTCCATAAGAGGGTTCGTTGACGCGTCTGGACCATCAAGTTTTCGAAGTTTAGATGATTTGTTGATGGCGTGA 1155 0.4346 MWMFSWISNIVFSCFNSLRHYARMESDDEDESSSIGNSLLWRRDLQRHSCGEFSFAVCQANGEIEDYSQVEIGSNVLFVGIYDGHGGPEASRFIRNRIFQHIIRIARESRTLCEGTLRQAISATEDDFMTIVSRSYGLDASMARVGSCVLIGLIWRGILYIANLGDSRAVVGCAGRCNSIIAEQLTRDHNVSGEDIRQELRALHPNDPDIVVMSRGAWRVKGIIQVSRTIGDAYLKRPPFSLDPTFPNLLSEPLTEPVLSAEPSLFSRILQPNDKFLIFASDGLWDHLSNEKAAEIVHRYPRNGIARRLIKTALKEAARKAGMEYRQLQNIEKGSRRVFHDDITVIVIFLRQEADVNVPELSIRGFVDASGPSSFRSLDDLLMA* 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g01980 384 SMART PP2C_4 46 348 IPR001932 -
Phac1g01980 384 ProSitePatterns PPM-type phosphatase domain signature. 78 86 IPR000222 GO:0043169
Phac1g01980 384 Pfam Protein phosphatase 2C 74 319 IPR001932 -
Phac1g01980 384 SUPERFAMILY PP2C-like 58 351 IPR036457 -
Phac1g01980 384 CDD PP2Cc 53 350 IPR001932 -
Phac1g01980 384 ProSiteProfiles PPM-type phosphatase domain profile. 49 350 IPR001932 -
Phac1g01980 384 Gene3D - 28 357 IPR036457 -
Phac1g01980 384 FunFam Probable protein phosphatase 2C 42 43 357 - -
Phac1g01980 384 PANTHER PROTEIN PHOSPHATASE 38 348 IPR015655 GO:0004722|GO:0006470
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g01980 Phac-Chr1 29615118 29618217 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g01980 3 375 PP2C-type Phosphatase Gene Family AT5G06750 55.928 6.19e-153 435
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g01980 K01102 - gmx:100806476 502.671
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac1g01980 1 29615118 29618217 Phac1g01980 1 29615118 29618217 ECH
Phac1g01980 1 29615118 29618217 Phac7g02514 7 29235427 29238511 PCT