Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g01967 ATGAACGAGAACAAGGTTCATTGGGGAGGATTGATTCAACAAACTCATGGACTAACTGGGGATTTTAATTCTGAGTTTGGCAACCATTACTGTCAATATTTTGATATCAGACAGGCCTGGAATATGGGACCACTTGCGATGGTTGGAGGAGAAGCTACAGATCAGTTGCCAAACATAGGCCATGTCAAATCATCTGGCACCATTATCAGCCGTTTTGAGTCACCAGCTTCTGCCTTTTATGCTACAGAAAACTGCATGGGATTTGCAGAATACGATTGCCAAGTTGGTATTCAACCTCAGTTATCTAAGATTAATGACTTGGAATTCCCTTTGTATCAATCTCCCAGGGAAAACCTTTTCTTGGATTCAGCAAATCAACCTGACTCCAGCTACGACTTGTCAAACACTTTGCAGTCCATAGTGAAATCTCAATTGAATAATAATCAATGTCGTGTATCCCCTGAAAGTTCCAATAAAATTTCATGTGGTAATTTTCCCACCACCAAGTTCCTTCCAATTGAACAACAGAAGTTGTTCATTGATGGTGTTATCAGGGGCTCCTCATTTCCTAACAAAGGAAGTCAGGACCGTATGGTTGCTTGTGGATCTTTTAATTTACCTGTTGCACATCTGAGATTTTCTTCTGAGATTGAGAAGTTGTCTCCAACACTTTCAGCAGCAAGTGTGTCTACTGTTGGAAACTCTGCTTCTAATGGGGCAGTAGTCTCAAGTAAAACACGTATAAGATGGGCTAAGGATCTTCATGAGAAGTTTGTTGAGTGTGTGAATCGCCTTGGAGGCTCTGAGCACGCAACACCTAAAGCTATATTAAAGATGATGGACACAGATGGTTTGACTATATTCCATGTCAAAAGTCATCTGCAGAAATATAGAATTGCGAAATTCATTCCAGATCCCAGTCAAGGAAAATCTGACAAAAGAACCCACATAAAGAATTTGCATCATCTTGATGTAAAAACTGGCTTACAAATTAGAGAGGCACTTAAGCTTCAATTAGATGCTCAAAGGTGTCTTCACGAACAACTAGAGGTTCAGAGAAAATTACAGTTGAGAATTGAGGAACAAGGAAGGCAACTAAAAAAAATGTTTGACCAGCAGCAAAAGACAAGTAATAACCTCTTAAATGCTCACGATTCAGCCACTGATGAGACAACAATTACTCATAAAGATGGTGAGGTTTCTGTTTCTGAAGGGGCTAACAATTCCTTCTTCACTTCCAAGGCCTCGCCGAGCCAATAA 1260 0.4016 MNENKVHWGGLIQQTHGLTGDFNSEFGNHYCQYFDIRQAWNMGPLAMVGGEATDQLPNIGHVKSSGTIISRFESPASAFYATENCMGFAEYDCQVGIQPQLSKINDLEFPLYQSPRENLFLDSANQPDSSYDLSNTLQSIVKSQLNNNQCRVSPESSNKISCGNFPTTKFLPIEQQKLFIDGVIRGSSFPNKGSQDRMVACGSFNLPVAHLRFSSEIEKLSPTLSAASVSTVGNSASNGAVVSSKTRIRWAKDLHEKFVECVNRLGGSEHATPKAILKMMDTDGLTIFHVKSHLQKYRIAKFIPDPSQGKSDKRTHIKNLHHLDVKTGLQIREALKLQLDAQRCLHEQLEVQRKLQLRIEEQGRQLKKMFDQQQKTSNNLLNAHDSATDETTITHKDGEVSVSEGANNSFFTSKASPSQ* 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g01967 419 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 238 392 IPR044848 GO:0003700
Phac1g01967 419 Gene3D - 244 303 - -
Phac1g01967 419 Coils Coil 332 352 - -
Phac1g01967 419 Pfam MYB-CC type transfactor, LHEQLE motif 329 376 IPR025756 -
Phac1g01967 419 MobiDBLite consensus disorder prediction 401 419 - -
Phac1g01967 419 Pfam Myb-like DNA-binding domain 249 298 IPR001005 -
Phac1g01967 419 MobiDBLite consensus disorder prediction 381 419 - -
Phac1g01967 419 FunFam Myb family transcription factor 244 302 - -
Phac1g01967 419 SUPERFAMILY Homeodomain-like 243 299 IPR009057 -
Phac1g01967 419 NCBIfam myb-like DNA-binding domain, SHAQKYF class 245 300 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g01967 Phac-Chr1 29503975 29507371 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g01967 229 373 G2-like Transcription Factor Family AT4G28610 55.782 1.09e-49 171
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Phac1g01967 Myb_DNA-binding 6.9e-06 CL0123