Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g01962 ATGTTACCCTTTCGAAAACTCAACACTCAATGCTTCTTCTTCCTTCTTAAACCCTGGCAAAACCCTAGATTCCAGAGCACGAAACCCGCCACCAAAATCGTCGGAAAAACCACCGTAAAAGAAGCCCAGGCCGCATTGCTCGAGTACCTTCACTCCACCCGCAGCCTCAACTTCTTAGACGCTGACAACATGTGCAGAAACTCGCCCTCCTTCCTCCAGGACCTCCTCGCCAAAACCCACTCGCACACGCCGCACGTGGACACCAAACGCTCCATCTCGCGCTACCTCCGCTACCACCCGATCAACGAGTTCGAGCCCTTCTTCGAGAGCGCGGGTCTCTCCCCTTCCGAGTACACGCCCCTTCTCCCGCCTCACATGATTTACCTAAACGACGACGTTCTGCTAATGGAGAATCACCACGCGCTCTGCAACTACGGGATTCCCCGCACCAAGATGGGGAGGGTTTTCAAACTCGCGCCTCAGGTTTTTGGGTATGAACCCGGGGTTTTGATCTCAAAGCTTCGGGAATACGAAAACCTCGGTGTTTCGCGGAAGACTTTGATAAATGTGGTTGCTTCCAGCCCCTGCGTTTTGGTTGGGGGTGTGGATTTTAATTTTGTTAAGGTTGTGGAGATGTTGAAGGGTGTTATTGGAAAGGATTGTGATTGGATTGGAGAGCATTTGTTGATTAACAAGGATTGTTGTAATTGGAAGGTGATGTTTCAGGTTTTGAGTTTGCTTTCTAGGGTTTTCAATGAGAAACAATGGGGTGATTTACTCTCTCGTCACCCTGGTTTGATTTTTGAGGAGTCCGGAGGTTGTGTGTTATCCTTGATAGACTTTTTGTTGAAATTTGGATTGTCTGTAAACCGGGTTTGTGTCATGCTGCACGAGTTTCCGGAGATTCGGGTAGTAAAATTTTTGTCCAATTTGAGGCTGTGTTTTCTGTTCTTGACTGAGATTGAGATGGAGGCTTCGGAGATTGGGAGGATTTTGCAGTCTCACTGGTTGGTGTTGGGTTCCTTCACCATGAAGAGAACGATAACTTTGCTTACTAACTTGAATGTTGGCAAGAAGCGCCTGTGTAGAGTTGTGAGGGATCATCCTCTAGTAATGAAGAGTTGGTCATTGGGAAGGAGAATTGAGCCTCTGGTTAACTCGTATGTGGAGTTTGAATCGAAGGCTCTGAAGAAGGAGTTCATGCTAAGGTTGGGGTTTGAAGAGAACTCCAATGAAATGGATGAGACGATTAAGTTGTTCAGGGGTAAGGGAGCTGAGCTTCAGGAGAGACTTGAATTTATTGTTAATGCTGGGTTGGATTATGAGGTTGCCTGTAAGATAATTCGAGATTCCCCGCGGATTCTTAGTCAGACCACGGATAGGATCAAAATGAAAATTGAGTCTCTTGTGAATGAAGGATATTCGATATCGGATTTGGAAACTTTTCCTTCCTTCCTTTCCTATTCGGCTCAAAGGGTTAAGCTAAGGTTTTCAATGTATAATTGGCTAAAAGAGCATGGAGCTGCAGAAGAAGGGCTTGCTTTGAGCACTATAATTGCATGCTCTGAAAAAGCGTTTGAGAAGCTGTACGTGAAGCGCCATCCGTCTGGCCTTCAAGTTTGGCAGGATTTAAAGGCACAAATTTCTTCGAAGGTTTAG 1659 0.4629 MLPFRKLNTQCFFFLLKPWQNPRFQSTKPATKIVGKTTVKEAQAALLEYLHSTRSLNFLDADNMCRNSPSFLQDLLAKTHSHTPHVDTKRSISRYLRYHPINEFEPFFESAGLSPSEYTPLLPPHMIYLNDDVLLMENHHALCNYGIPRTKMGRVFKLAPQVFGYEPGVLISKLREYENLGVSRKTLINVVASSPCVLVGGVDFNFVKVVEMLKGVIGKDCDWIGEHLLINKDCCNWKVMFQVLSLLSRVFNEKQWGDLLSRHPGLIFEESGGCVLSLIDFLLKFGLSVNRVCVMLHEFPEIRVVKFLSNLRLCFLFLTEIEMEASEIGRILQSHWLVLGSFTMKRTITLLTNLNVGKKRLCRVVRDHPLVMKSWSLGRRIEPLVNSYVEFESKALKKEFMLRLGFEENSNEMDETIKLFRGKGAELQERLEFIVNAGLDYEVACKIIRDSPRILSQTTDRIKMKIESLVNEGYSISDLETFPSFLSYSAQRVKLRFSMYNWLKEHGAAEEGLALSTIIACSEKAFEKLYVKRHPSGLQVWQDLKAQISSKV* 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g01962 552 Pfam mTERF 425 527 IPR003690 GO:0003690|GO:0006355
Phac1g01962 552 Pfam mTERF 250 388 IPR003690 GO:0003690|GO:0006355
Phac1g01962 552 Gene3D Transcription termination factor 3, mitochondrial 67 236 IPR038538 -
Phac1g01962 552 Gene3D Transcription termination factor 3, mitochondrial 275 544 IPR038538 -
Phac1g01962 552 SMART mt_12 476 509 IPR003690 GO:0003690|GO:0006355
Phac1g01962 552 SMART mt_12 293 324 IPR003690 GO:0003690|GO:0006355
Phac1g01962 552 SMART mt_12 445 475 IPR003690 GO:0003690|GO:0006355
Phac1g01962 552 SMART mt_12 153 183 IPR003690 GO:0003690|GO:0006355
Phac1g01962 552 SMART mt_12 188 220 IPR003690 GO:0003690|GO:0006355
Phac1g01962 552 SMART mt_12 257 288 IPR003690 GO:0003690|GO:0006355
Phac1g01962 552 PANTHER CGI-12 PROTEIN-RELATED 243 534 IPR003690 GO:0003690|GO:0006355
Phac1g01962 552 FunFam Transcription termination factor MTEF18, mitochondrial 278 544 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g01962 Phac-Chr1 29406272 29408928 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Phac1g01962 mTERF 1.4e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g01962 - - gmx:100807690 827.78
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac1g01962 1 29406272 29408928 Phac1g01962 1 29406272 29408928 ECH