Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g01958 ATGATTCGCCACTTTCTCTATGTGCATCTTAATCTCTTTGTATTTTCAATTTTGATTTCTCAGAGCTTGGCGTTCACGCATCAACACGAAGTGTCAGCTCTCCAGGATCTATACAGAACCTTTAACTACCCACCGATGCTCAAAGGATGGAATGGTAGCGATCCTTGTGGAGAGTCTTGGACAGGAGTTGCTTGTTCTGGGCCATCAGTTATACAGCTAGAACTTCAAGGATTAAACCTCACTGGGTATATCGGAAGCCTGCTATATAATCTACCTAACTTGAAGCAACTTGATGTCAGTTCAAATAACATAAAGGGCGAGATACCATTCGGTTTACCCCCCAATGTCTCTTATATGAATTTAAGCCACAATTTACTACATGGACCAATTGGTGATGTATTTACTGGTTTAGATAATCTCAAAGGAATGGACCTTTCATACAATAATTTCTCAGGAGACCTACCGTATTCATTTGGTTCCTTAAGAAACCTTGCCAGATTGTTCCTGCAGAATAACAGATTCACTGGATCAGTCGCCTACTTGGCTGAACTTCCACTAACAGATTTGAACATTCAAGATAATCTGTTTAGTGGCATTCTTCCGCAGCATTTTCAATCCATACCGAATTTATGGATTGGAGAGAATAAATTCCATGTGGCCGACAACTCTCCTCCCTGGACTTTTCCGCTGGATACCGTGTCAGTTGAGCAGAACACTAGTAGCCCACCCACTACTCAGGCAAATGCCATAGAGAATTATTCCCCTCCCACAGTAAGTGAGGCTCCTCCCAGAGTAAATGAGGTTCATCCCAGGGTAAATGAGGCTCCTCCCAGAGTAAATGAGGTTCATCCCAGGGTAAATGAGGCTCCTCCCAGAGTAAGTGACGTTCTTCCCCAAGTACACGAGGCTCCTCTCAGAGTAATTAAGCACAAGAAAAATCATTTAGGTCCCGGAGGAATAGCATTTATGATTGGTGGAGGAACACTGATGGCCACAGGGGTGGCTCTCTTTGTTGCAATCCGTTTGAATAAACTTCGTCTACAGAGCCCGAACTTGAAGAGCTCAGAAAGCAACCATGGCTCATTTCATTCTCATCCGACCAGTGCAACCATAGGGGTATCTTCTACCGCACTCCAGGAGAGCCCACGCATTCCCCCCTTCAATTCTGCATCCTTTTTGGGTCCTGTGAGATTACTTTCCATAAACCATAACAATACCGAGGAACCAATCAAAAAAAGTTTTTCTAAAAGAGGCAGATCCACTGGAATAACGAAAATTTACACGGTAGCAGAGCTCGAGTTAGCTACTAATTGCTTCAGTGAAGCCAACATTCTGGGAGAGGGATCTCTTGGTCCTGTTTATAGAGCTAAATTTCCGGATGACAAAATTTTGGCCGTGAAGAAGATAAACCTTTCTTTCAAAGAAGAGGAAAAGCTCTTGGATGTCATTTGCACGGTTTCCCGACTGAAGCACCCCAACATCGTAGCACTCAATGGTTACTGTTTGGATAACGGAAAGGGTTTATTTGTTTACGATTATGTTGGAAATGTCACTCTAAACGACGCTCTTCACAACGAGGCATGCAAACCTCTGTCATGGGTTCACCGTCTCCGGATTGCTCTAGGTGTGGCTCAGGCTCTACACTATTTGCACTCAGAGTTCTGCCCTCCCGTGGCTCACGGCAATTTGAAGGCTGCCAATGTTCTACTGGATGAAAATTTGATGCCTCGTGTTTGTAACTGTAGCTTGGTTACTTTGAGAGCACTGAATATCAATCAAGTTGAAATTCCGGCTAATGAGATTTATATTGAAGAGATGGGCTACGTTTCGCCAGATCATGGCCAACCAGGAACCAGCAGCAGAAAGAGAGACGTTTTTGCCTTCGGGGTGTTGCTTCTGGAACTGTTAACAGGAAAGAAAGCTTTCGATAGAGCCAGGTCAGGGGAGGAGCAATATCTGGTGAAATTGGCTCCCCCCATGCTTCCTTATAGAGCGAGTTTGGAACAACTGGTGGATCCCCGCATGAAAAGAACATTTTCATCCAAGGCTCTTTCTCGTTATGCTGATATCATCTCCCTCTGTATACAGCCTGTAAGGCAACTCCGTCCTGCAATGACCGAAGTTATGGAGTCTCTTAAATCTTTATACCAAAAGTTCGACATTGAAACGAGCGATGTAGCAGATGGTACTGAACTTGATCCATTTTAG 2208 0.4416 MIRHFLYVHLNLFVFSILISQSLAFTHQHEVSALQDLYRTFNYPPMLKGWNGSDPCGESWTGVACSGPSVIQLELQGLNLTGYIGSLLYNLPNLKQLDVSSNNIKGEIPFGLPPNVSYMNLSHNLLHGPIGDVFTGLDNLKGMDLSYNNFSGDLPYSFGSLRNLARLFLQNNRFTGSVAYLAELPLTDLNIQDNLFSGILPQHFQSIPNLWIGENKFHVADNSPPWTFPLDTVSVEQNTSSPPTTQANAIENYSPPTVSEAPPRVNEVHPRVNEAPPRVNEVHPRVNEAPPRVSDVLPQVHEAPLRVIKHKKNHLGPGGIAFMIGGGTLMATGVALFVAIRLNKLRLQSPNLKSSESNHGSFHSHPTSATIGVSSTALQESPRIPPFNSASFLGPVRLLSINHNNTEEPIKKSFSKRGRSTGITKIYTVAELELATNCFSEANILGEGSLGPVYRAKFPDDKILAVKKINLSFKEEEKLLDVICTVSRLKHPNIVALNGYCLDNGKGLFVYDYVGNVTLNDALHNEACKPLSWVHRLRIALGVAQALHYLHSEFCPPVAHGNLKAANVLLDENLMPRVCNCSLVTLRALNINQVEIPANEIYIEEMGYVSPDHGQPGTSSRKRDVFAFGVLLLELLTGKKAFDRARSGEEQYLVKLAPPMLPYRASLEQLVDPRMKRTFSSKALSRYADIISLCIQPVRQLRPAMTEVMESLKSLYQKFDIETSDVADGTELDPF* 736
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g01958 735 ProSiteProfiles Protein kinase domain profile. 439 719 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac1g01958 735 Gene3D Phosphorylase Kinase; domain 1 401 513 - -
Phac1g01958 735 Gene3D Ribonuclease Inhibitor 25 250 IPR032675 -
Phac1g01958 735 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 19 715 IPR046959 -
Phac1g01958 735 FunFam Leucine-rich repeat receptor-like protein kinase 514 723 - -
Phac1g01958 735 SUPERFAMILY L domain-like 28 212 - -
Phac1g01958 735 FunFam protein STRUBBELIG-RECEPTOR FAMILY 3 27 118 - -
Phac1g01958 735 Pfam Leucine rich repeat N-terminal domain 28 66 IPR013210 -
Phac1g01958 735 Gene3D Transferase(Phosphotransferase) domain 1 515 731 - -
Phac1g01958 735 FunFam Protein STRUBBELIG-RECEPTOR FAMILY 8 404 513 - -
Phac1g01958 735 FunFam protein STRUBBELIG-RECEPTOR FAMILY 3 119 228 - -
Phac1g01958 735 Pfam Protein kinase domain 440 710 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac1g01958 735 SUPERFAMILY Protein kinase-like (PK-like) 420 712 IPR011009 -
Phac1g01958 735 Pfam Leucine rich repeat 114 174 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g01958 Phac-Chr1 29368647 29374475 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g01958 12 735 Strubbelig Receptor Gene Family AT5G06820 41.558 6.74e-159 476
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Phac1g01958 Pkinase 1.1e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g01958 - - vra:106757519 1217.22