Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g01950 ATGGGTCCCCAAAGCAACCTCCTATCTCTTTTGGTTGCTCTGGCCGCAGTTTTTGCATATTTGTATCTCATAAATCCAATTCCACAGTTTCTCATAAATCCAATTTCACAGGATCTCATAAATGCCTTGTCACCTTCATCTGCATACTTGGCAAAACCTTTAACAGGGAACTTCCACCGACATCACAAGAAACACCCTAGTGGTGGGAATACTGATTCTATTTGTGATGATTTTCCATCAGGAATTCCACCTCCAAATACCAATACAACTTCGTATCTTTGTGTTGATCGAAGAGGGTGCTGTAATTTCACAACAGTACAAGCAGCCGTGAATGCAGTTCCAGATTTTAGTGTCAAAAGAACCATAATATGGATAAACATTGGCATGTACTATGAGAAGGTTATGGTGCCCAAAACAAAACCCAACATTACATTTCAAGGACAAGGCTATACTTCAACTGCAATTGCATGGAATGACACCGCATTATCCGCGAATGGAACATTTTATAGTGGCTCTGTACAAGTTTTCGCCTCCAATTTCATTGCTAAGAACATAAGCTTCATGAATTTAGCACCAATGCCAAGTCCTGGGGCTGTTGGGGCACAAGCAGTAGCTATTAGAGTATCTGGAGATCAATCTGAATTTAGGGGTTGTGGATTCTTTGGAGCACAAGACACCCTTCACGATGATAAGGGTCGCCATTACTTCAAAGATTGCTACATTCAAGGCTCCATTGACTTCATATTCGGCAATGCAAGGTCCCTCTACGAGAATTGTCAAATAGTTTCTATAGCGAACCCCGTACCAGTGGGACAAAGGAGCATAAATGGTGCTGTTACAGCTCATGGTAGAGTTTCAGGTGATGAAAATACAGGGTTTGCATTTGTGAACTGTACAATTGGAGGAAACGGTAGAATATGGTTGGGTCGAGCATGGAGACCTTATTCTCGTGTTGTCTTTGCCTCCACATTAATGTCAGATATTATTGCTCCTGAAGGTTGGAATGATTTCAACGACCCTTCTAGAGACCAGTGA 1035 0.4184 MGPQSNLLSLLVALAAVFAYLYLINPIPQFLINPISQDLINALSPSSAYLAKPLTGNFHRHHKKHPSGGNTDSICDDFPSGIPPPNTNTTSYLCVDRRGCCNFTTVQAAVNAVPDFSVKRTIIWINIGMYYEKVMVPKTKPNITFQGQGYTSTAIAWNDTALSANGTFYSGSVQVFASNFIAKNISFMNLAPMPSPGAVGAQAVAIRVSGDQSEFRGCGFFGAQDTLHDDKGRHYFKDCYIQGSIDFIFGNARSLYENCQIVSIANPVPVGQRSINGAVTAHGRVSGDENTGFAFVNCTIGGNGRIWLGRAWRPYSRVVFASTLMSDIIAPEGWNDFNDPSRDQ* 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g01950 344 ProSitePatterns Pectinesterase signature 2. 241 250 IPR033131 -
Phac1g01950 344 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 81 343 - -
Phac1g01950 344 Pfam Pectinesterase 95 339 IPR000070 GO:0030599|GO:0042545
Phac1g01950 344 Gene3D - 86 344 IPR012334 -
Phac1g01950 344 SUPERFAMILY Pectin lyase-like 92 340 IPR011050 -
Phac1g01950 344 FunFam Pectinesterase 87 344 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g01950 Phac-Chr1 29340627 29343159 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g01950 73 343 Carbohydrate Esterase AT1G05310 75.646 6.17e-161 454
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g01950 - - gmx:100806629 619.772