Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g01949 ATGGGTCCCCAAAGCAACCTCCTATCTCTTTTGGTTGCTCTGGCCGCAGTTTTTGCATATTTGTATCTCATAAATCCAATTCCACAGTTTCTCATAAATCCAATTTCACAGGATCTCATAAATGCCTTGTCACCTTCATCTGCATACTTGGCAAAACCTTTAACAGGGAACTTCCACCGACATCACAAGAAACACCCTAGTGGTGGGAATACTGATTCTATTTGTGATGATTTTCCATCAGGAATTCCACCTCCAAATACCAATACAACTTCGTATCTTTGTGTTGATCGAAGAGGGTGCTGTAATTTCACAACAGTACAAGCAGCCGTGAATGCAGTTCCAGATTTTAGTGTCAAAAGAACCATAATATGGATAAACATTGGCATGTACTATGAGAAGGTTATGGTGCCCAAAACAAAACCCAACATTACATTTCAAGGACAAGGCTATACTTCAACTGCAATTGCATGGAATGACACCGCATTATCCGCGAATGGAACATTTTATAGTGGCTCTGTACAAGTTTTCGCCTCCAATTTCATTGCTAAGAACATAAGCTTCATGAATTTAGCACCAATGCCAAGTCCTGGGGCTGTTGGGGCACAAGCAGTAGCTATTAGAGTATCTGGAGATCAATCTGAATTTAGGGGTTGTGGATTCTTTGGAGCACAAGACACCCTTCACGATGATAAGGGTCGCCATTACTTCAAAGATTGCTACATTCAAGGCTCCATTGACTTCATATTCGGCAATGCAAGGTCCCTCTACGAGAATTGTCAAATAGTTTCTATAGCGAACCCCGTACCAGTGGGACAAAGGAGCATAAATGGTGCTGTTACAGCTCATGGTAGAGTTTCAGGTGATGAAAATACAGGGTTTGCATTTGTGAACTGTACAATTGGAGGAAACGGTAGAATATGGTTGGGTCGAGCATGGAGACCTTATTCTCGTGTTGTCTTTGCCTCCACATTAATGTCAGATATTATTGCTCCTGAAGGTTGGAATGATTTCAACGACCCTTCTAGAGACCAGACTATCTTCTATGGAGAATATAATTGCTCGGGGTCAGGGGCTAACATGAACTTGAGGGCTTCTTATGTACAGAAATTAAATGAAACAGAAGCTTCTGCTTTCCTCAACACTACTTTTATAGATGGCGACCAATGGTTGGAAACTTCTATATAA 1185 0.4135 MGPQSNLLSLLVALAAVFAYLYLINPIPQFLINPISQDLINALSPSSAYLAKPLTGNFHRHHKKHPSGGNTDSICDDFPSGIPPPNTNTTSYLCVDRRGCCNFTTVQAAVNAVPDFSVKRTIIWINIGMYYEKVMVPKTKPNITFQGQGYTSTAIAWNDTALSANGTFYSGSVQVFASNFIAKNISFMNLAPMPSPGAVGAQAVAIRVSGDQSEFRGCGFFGAQDTLHDDKGRHYFKDCYIQGSIDFIFGNARSLYENCQIVSIANPVPVGQRSINGAVTAHGRVSGDENTGFAFVNCTIGGNGRIWLGRAWRPYSRVVFASTLMSDIIAPEGWNDFNDPSRDQTIFYGEYNCSGSGANMNLRASYVQKLNETEASAFLNTTFIDGDQWLETSI* 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g01949 394 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 81 391 - -
Phac1g01949 394 FunFam Pectinesterase 87 394 - -
Phac1g01949 394 ProSitePatterns Pectinesterase signature 2. 241 250 IPR033131 -
Phac1g01949 394 SUPERFAMILY Pectin lyase-like 92 391 IPR011050 -
Phac1g01949 394 Gene3D - 86 394 IPR012334 -
Phac1g01949 394 Pfam Pectinesterase 95 387 IPR000070 GO:0030599|GO:0042545
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g01949 Phac-Chr1 29340627 29343159 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g01949 73 393 Carbohydrate Esterase AT1G05310 74.766 0.0 530
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g01949 - - gmx:100806629 706.827