Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g01944 ATGAGGCCTCCGACTCTCAACATTTTCCCATCTAAGCCTATGCACGTAGAGCCATCATCGTCCAAGTCCAAGGCTAACATAGAGTTAGTTTCTCCGCAAACAAGTGGTTCAAAGAGACCATCAGAGCCGTCGATGGAGTTGGCCAACCCTCGAAACGAAGGTGCTTCTGCCCCTCAACCACCCAAAGCTGTCAAGCGAGAGAGCAATCGCAAAGGTCCAACGTCAAGTTCTGAACAAGAAGGACCTAAAACACCAGATCCTAAGACACTGAGAAGACTTGCTCAGAATAGAGAGGCAGCTAGGAAAAGCAGGCTTAGGAAAAAGGCATATGTTCAACAGCTAGAGTCAAGTAGGGTTAGGCTTAATCAGCTGGAACAAGATCTACAACGTGCTAGAACTCAGGGCATGTTCTTAGGTGGAGGTGCACTTTTGGGAGGAGAGCAAAGCCTCCCTGTCGCTATGAATACCATTAGCTCGGAGGCTGCAATGTTTGACGTGGAATATGCAAGATGGGTTGAGGAGCACCACCGCATAGTTTGTGAGCTGAGAGCTGCAGTGCAAGAGCACCTTCCTGAGAACGAGCTTAGACTTTTTGTGGACAATTGCTTGGCGCATTATGATCAAGTCATGAACCTCAAGAGCCTAGTGGCAAAAACAGACGTGTTTCATCTGGTTTCTGGCATGTGGAAGACCCCAGCTGAACGTTGTTTTATGTGGATCGGAGGATTCAGGCCTTCTGAACTCATTAAGATTATTCTGAGTCAAATTGAGCCTCTGACGGAGCAACAAATATTGGGTATATGTGGATTGCAACAATCGACTCAAGAGGCAGAAGAGGCTCTCTCTCAAGGGCTGGAGGCTCTGAATCAATCTCTTTCGGACACAATAGCTTCAGACTCTCTTAGCTATCCTCCCAATATGGCTAACTATATGGGACAAATGGCTGTTGCCATGAACAAGCTCTCAACTCTCGAAGGCTTCGTTAGACAGGCAGATAATCTTCGGCACCAAACCATTCACCGTCTGCATCAGCTCCTAACAACGCGTCAAGCAGCAAGGTGTTTTCTGGCCATAGCCGAGTACTTCCATCGTCTTCGAGCTCTGAGTTCATTGTGGTTGGCACGCCCTCGCGTAGAATAG 1140 0.4798 MRPPTLNIFPSKPMHVEPSSSKSKANIELVSPQTSGSKRPSEPSMELANPRNEGASAPQPPKAVKRESNRKGPTSSSEQEGPKTPDPKTLRRLAQNREAARKSRLRKKAYVQQLESSRVRLNQLEQDLQRARTQGMFLGGGALLGGEQSLPVAMNTISSEAAMFDVEYARWVEEHHRIVCELRAAVQEHLPENELRLFVDNCLAHYDQVMNLKSLVAKTDVFHLVSGMWKTPAERCFMWIGGFRPSELIKIILSQIEPLTEQQILGICGLQQSTQEAEEALSQGLEALNQSLSDTIASDSLSYPPNMANYMGQMAVAMNKLSTLEGFVRQADNLRHQTIHRLHQLLTTRQAARCFLAIAEYFHRLRALSSLWLARPRVE* 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g01944 379 Pfam bZIP transcription factor 88 126 IPR004827 GO:0003700|GO:0006355
Phac1g01944 379 ProSiteProfiles DOG1 domain profile. 161 375 IPR025422 GO:0006351|GO:0043565
Phac1g01944 379 SMART brlzneu 84 157 IPR004827 GO:0003700|GO:0006355
Phac1g01944 379 MobiDBLite consensus disorder prediction 1 91 - -
Phac1g01944 379 Pfam Seed dormancy control 179 253 IPR025422 GO:0006351|GO:0043565
Phac1g01944 379 Coils Coil 107 134 - -
Phac1g01944 379 SUPERFAMILY Leucine zipper domain 88 130 IPR046347 GO:0003700|GO:0006355
Phac1g01944 379 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 86 130 IPR004827 GO:0003700|GO:0006355
Phac1g01944 379 MobiDBLite consensus disorder prediction 14 42 - -
Phac1g01944 379 FunFam BZIP family transcription factor 87 136 - -
Phac1g01944 379 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 91 106 IPR004827 GO:0003700|GO:0006355
Phac1g01944 379 PANTHER TRANSCRIPTION FACTOR TGA9 13 377 - -
Phac1g01944 379 Gene3D - 87 137 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g01944 Phac-Chr1 29217933 29225118 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g01944 1 377 Basic region leucine zipper (bZIP) Transcription Factor Gene Family AT5G06839 69.309 0.0 534
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Phac1g01944 DOG1 5.8e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g01944 K14431 - gmx:100815176 706.827