Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g01943 ATGGCTTCCAAGACCACCAACCCAACAACAAATAATCAATTCGAACCACTCCCACCACCTCAGCACCGTCACCCTCATCCTCATCATTATCAGTTTCAACAACACCAACATCATCAAATTCATGACCATCAAATTTCTTTTGGAATGATGCAATCCTCTTCATCATCTTCCTCTATCCCCGGAAACTACCTCAGAGGCAAGGATTCCGGGGCTTATGACTTGGGTGAATTGGATCAAGCCTTTTTCCTCTACCTTGATGGACAAGCAGACCCCTCCACTGTTCAAGACCAAAGACAGAACTCATCATCAGGAATGAGGCCTCCGACTCTCAACATTTTCCCATCTAAGCCTATGCACGTAGAGCCATCATCGTCCAAGTCCAAGGCTAACATAGAGTTAGTTTCTCCGCAAACAAGTGGTTCAAAGAGACCATCAGAGCCGTCGATGGAGTTGGCCAACCCTCGAAACGAAGGTGCTTCTGCCCCTCAACCACCCAAAGCTGTCAAGCGAGAGAGCAATCGCAAAGGTCCAACGTCAAGTTCTGAACAAGAAGGACCTAAAACACCAGATCCTAAGACACTGAGAAGACTTGCTCAGAATAGAGAGGCAGCTAGGAAAAGCAGGCTTAGGAAAAAGGCATATGTTCAACAGCTAGAGTCAAGTAGGGTTAGGCTTAATCAGCTGGAACAAGATCTACAACGTGCTAGAACTCAGGGCATGTTCTTAGGTGGAGGTGCACTTTTGGGAGGAGAGCAAAGCCTCCCTGTCGCTATGAATACCATTAGCTCGGAGGCTGCAATGTTTGACGTGGAATATGCAAGATGGGTTGAGGAGCACCACCGCATAGTTTGTGAGCTGAGAGCTGCAGTGCAAGAGCACCTTCCTGAGAACGAGCTTAGACTTTTTGTGGACAATTGCTTGGCGCATTATGATCAAGTCATGAACCTCAAGAGCCTAGTGGCAAAAACAGACGTGTTTCATCTGGTTTCTGGCATGTGGAAGACCCCAGCTGAACGTTGTTTTATGTGGATCGGAGGATTCAGGCCTTCTGAACTCATTAAGATTATTCTGAGTCAAATTGAGCCTCTGACGGAGCAACAAATATTGGGTATATGTGGATTGCAACAATCGACTCAAGAGGCAGAAGAGGCTCTCTCTCAAGGGCTGGAGGCTCTGAATCAATCTCTTTCGGACACAATAGCTTCAGACTCTCTTAGCTATCCTCCCAATATGGCTAACTATATGGGACAAATGGCTGTTGCCATGAACAAGCTCTCAACTCTCGAAGGCTTCGTTAGACAGGCAGATAATCTTCGGCACCAAACCATTCACCGTCTGCATCAGCTCCTAACAACGCGTCAAGCAGCAAGGTGTTTTCTGGCCATAGCCGAGTACTTCCATCGTCTTCGAGCTCTGAGTTCATTGTGGTTGGCACGCCCTCGCGTAGAATAG 1452 0.4738 MASKTTNPTTNNQFEPLPPPQHRHPHPHHYQFQQHQHHQIHDHQISFGMMQSSSSSSSIPGNYLRGKDSGAYDLGELDQAFFLYLDGQADPSTVQDQRQNSSSGMRPPTLNIFPSKPMHVEPSSSKSKANIELVSPQTSGSKRPSEPSMELANPRNEGASAPQPPKAVKRESNRKGPTSSSEQEGPKTPDPKTLRRLAQNREAARKSRLRKKAYVQQLESSRVRLNQLEQDLQRARTQGMFLGGGALLGGEQSLPVAMNTISSEAAMFDVEYARWVEEHHRIVCELRAAVQEHLPENELRLFVDNCLAHYDQVMNLKSLVAKTDVFHLVSGMWKTPAERCFMWIGGFRPSELIKIILSQIEPLTEQQILGICGLQQSTQEAEEALSQGLEALNQSLSDTIASDSLSYPPNMANYMGQMAVAMNKLSTLEGFVRQADNLRHQTIHRLHQLLTTRQAARCFLAIAEYFHRLRALSSLWLARPRVE* 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g01943 483 FunFam BZIP family transcription factor 191 240 - -
Phac1g01943 483 Pfam bZIP transcription factor 192 230 IPR004827 GO:0003700|GO:0006355
Phac1g01943 483 Pfam Seed dormancy control 283 357 IPR025422 GO:0006351|GO:0043565
Phac1g01943 483 PANTHER TRANSCRIPTION FACTOR TGA9 101 481 - -
Phac1g01943 483 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 190 234 IPR004827 GO:0003700|GO:0006355
Phac1g01943 483 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 195 210 IPR004827 GO:0003700|GO:0006355
Phac1g01943 483 ProSiteProfiles DOG1 domain profile. 265 479 IPR025422 GO:0006351|GO:0043565
Phac1g01943 483 MobiDBLite consensus disorder prediction 1 41 - -
Phac1g01943 483 Gene3D - 191 241 - -
Phac1g01943 483 Coils Coil 211 238 - -
Phac1g01943 483 SMART brlzneu 188 261 IPR004827 GO:0003700|GO:0006355
Phac1g01943 483 MobiDBLite consensus disorder prediction 91 195 - -
Phac1g01943 483 MobiDBLite consensus disorder prediction 91 109 - -
Phac1g01943 483 MobiDBLite consensus disorder prediction 118 146 - -
Phac1g01943 483 SUPERFAMILY Leucine zipper domain 192 234 IPR046347 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g01943 Phac-Chr1 29217933 29225118 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g01943 61 481 Basic region leucine zipper (bZIP) Transcription Factor Gene Family AT5G06839 65.385 0.0 557
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Phac1g01943 DOG1 8.5e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g01943 K14431 - gmx:100815176 825.469