Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g01935 ATGGATGCTGCTGGTGCAACCCTTTTGGGTTACATTTTCTCCTCCTCCTCCTTAGCTTTCCTTCTTTTCACTCTACTTTTGAAGTCCTTTGGCATTTTACGAACCAAAAATGGCAGTGTTGGACCTCCACCATCTCCACCATCGCTTCCCATCATCGGTCATCTCCACCTTGTGGGTTCCGTCGTACCAAAATCATTCCAAGCTCTGGCTCACCGTTATGGCCCTCTCATTCAGCTCCGTTTAGGTGCCTCAACATGCGTAGTTGTCTCCAACGCCCAAGTCGCCAAAGAAGTCATGAAAACACATGACCTCAATTTCTGTTACCGACCCCAGTTTGGATCCTCAGAGAACTACTTATACAAAGGCTCTGATTTCATCACTGCCCCATATGGCCCTTATTGGCGCTTCATCAAAAAGCTTTGCGTTACTCAACTTCTCTCCACCACGCAGCTTGGGCGCTTACGGCACATCCGGCAGCAGGAGATAGAGAAGCTCTTGAAATCTCTCCTGGAGTGTTCCTCTGAAGGCAGGGAAACGGATTTGAGCCGTGATCTTGCTGCTTTGACCAACAATGTCCTGTGTCGGATGGCCATGAGTACGACCTGTTGTTTGGACGACGTTAATGATGGTGAGGATATTATTGGCCTGGTGACGGAGTTTATGCACATGGGAGCCAAGTTGAGCATGGGTGAGGTGTTGGGACCATTGGGAAAGTTTGACTTGTTTGGGTATGGGAAGAAGCTTGTCAGAATAGTTGGTAAATTCGACCGGATTTTGGAGCGCATCTTACAGGAACATGAAGCGAACAACTCCGAAAGAGGGGACATGATGGATATTCTATTGCGAGTCCACAAAGATTCAAATGCTGAGATGAGGTTAACAAGGAATGATATCAAGGCCTTCTTCCTGGATATTTTCCTAGCGGGAACAGACACGTCTTCAACAGCGTCCCAGTGGGCCATGGCAGAAATCATAAACAGCCCAGGAGTGTTGACGAAGGTGAGGGAAGAGATTGATGCAGTGGTGGGTTCTAGCAGGTTGGTCACTGAATCAGACCTTCCAAATCTACCTTATCTCCAAGCTGTTGTGAAGGAAGTGCTAAGACTCCACCCAACGGCACCGTTCGCTCTTAGAGAATCAGCAGAGGACTGCACCATCAACGGGTATGATATAAAGGGCAAGACACGGACACTGATCAATGTGTACGCCATCATGCGGGACCCAGAAGCGTGGGCGAACCCAGAGGAGTTTATACCAGAAAGGTTCTTGGTAGACGACAGTGATGAGATGAAGGGTGGTGATTTCAGATACCTTCCATTTGGATCTGGGAGGAGGGGATGCCCTGGATCTTCACTTGCCTTAACGGTTACACAAGGGACAGTTGCATCACTGATCCAATGTTTTGAATGGAAGACGAAAGGGGGAGAGAGGGTTTGTTTGGAAGAAGGATCATCATTTTCTACAGGATTGGCAAAGCCACTTGTTTGTTACCCTGTCACTCGTTTTAATCCTTTTTAA 1518 0.4789 MDAAGATLLGYIFSSSSLAFLLFTLLLKSFGILRTKNGSVGPPPSPPSLPIIGHLHLVGSVVPKSFQALAHRYGPLIQLRLGASTCVVVSNAQVAKEVMKTHDLNFCYRPQFGSSENYLYKGSDFITAPYGPYWRFIKKLCVTQLLSTTQLGRLRHIRQQEIEKLLKSLLECSSEGRETDLSRDLAALTNNVLCRMAMSTTCCLDDVNDGEDIIGLVTEFMHMGAKLSMGEVLGPLGKFDLFGYGKKLVRIVGKFDRILERILQEHEANNSERGDMMDILLRVHKDSNAEMRLTRNDIKAFFLDIFLAGTDTSSTASQWAMAEIINSPGVLTKVREEIDAVVGSSRLVTESDLPNLPYLQAVVKEVLRLHPTAPFALRESAEDCTINGYDIKGKTRTLINVYAIMRDPEAWANPEEFIPERFLVDDSDEMKGGDFRYLPFGSGRRGCPGSSLALTVTQGTVASLIQCFEWKTKGGERVCLEEGSSFSTGLAKPLVCYPVTRFNPF* 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g01935 505 Gene3D Cytochrome P450 32 492 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phac1g01935 505 PRINTS E-class P450 group I signature 297 314 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phac1g01935 505 PRINTS E-class P450 group I signature 70 89 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phac1g01935 505 PRINTS E-class P450 group I signature 447 470 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phac1g01935 505 PRINTS E-class P450 group I signature 94 115 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phac1g01935 505 PRINTS E-class P450 group I signature 437 447 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phac1g01935 505 PRINTS E-class P450 group I signature 188 206 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phac1g01935 505 PRINTS E-class P450 group I signature 400 424 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phac1g01935 505 PRINTS E-class P450 group I signature 317 343 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phac1g01935 505 PRINTS E-class P450 group I signature 360 378 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phac1g01935 505 CDD CYP93 74 498 - -
Phac1g01935 505 PRINTS P450 superfamily signature 447 458 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phac1g01935 505 PRINTS P450 superfamily signature 361 372 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phac1g01935 505 PRINTS P450 superfamily signature 438 447 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phac1g01935 505 PRINTS P450 superfamily signature 308 325 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phac1g01935 505 FunFam Cytochrome P450 family protein 34 496 - -
Phac1g01935 505 SUPERFAMILY Cytochrome P450 41 501 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phac1g01935 505 Pfam Cytochrome P450 43 485 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phac1g01935 505 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 440 449 IPR017972 GO:0005506|GO:0016705
Phac1g01935 505 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 20 487 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g01935 Phac-Chr1 29157788 29159801 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g01935 1 505 Cytochrome P450 AT2G42250 52.408 0.0 538
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g01935 - - gmx:106794180 730.324