Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g01928 ATGCCAATGCATCATCTTCTTATATCACTCCTTCTCTTCTTCGTCCTTCCTCCAACCACCTCTCTCAACTCAGACGGCCTCTCCCTCCTCGCCCTCAAAGCCGCCGTCGACTCCGACCCCACCGCCGTTCTCAGCTCCTGGTCGGAAAACGACGCCACTGCATGCCACTGGCCCGGCGTGTCCTGCACCGGCGAAAGAGTTACCCAACTCTCTCTCCCTGACAAGAACCTCAGCGGTTACATTCCCTCCGAACTGGGATTTCTCACCTCCCTCAAAAGACTGAGTCTTCCACACAACAACTTCTCCAACGCCATTCCTCCCTCTCTCTTCAACGCCACCACCCTCATTGTCCTTGACCTCTCTCACAACTCGCTCCGTGGTTCCCTTCCCTCACACTTTCTCTCCCTGAAGTTCCTTCGCCATTTGGACCTCTCCTCCAACTATCTCAACGGTTCCCTCCCTTCTACCCTCTCCGATCTCACTTCTCTCACCGGAACTCTCAATCTTTCTTTCAACCTCTTTTCAGGCGGGATTCCAGCCACCCTTTCTAACCTGCCCGTGGCTGTGAGCCTCGACCTCCGCAACAACAACCTCACCGGAAAAATCCCCCAGGTGGGGTCCCTGCTAAATCAGGGTCCCACCGCGTTTTCTGGCAACCCTGGACTCTGTGGCTTCCCCTTGCAAACCGCGTGTCCCGAAGCGCAAAAGCCTGGGATTTTCGCCAACCCTGAAGAGGGATTCCCTCAGAACCCCAATGCGCTTCACCCCGAAGGCTCAGACCAGAGACTGAAACCGCACGGTGGTGGCTCCGTCGCGGTTCTTGTCATCTCCGGGCTTTCCGTCGCGGTTGGAGCGGTTTCTCTCTCGCTGTGGGTTTTCCGGCGACGGTGGGGCAGCGGCGAGGAGGGGAAATTGGGGGGGCAGAAGTTGGAGAGCGAGGTGGATGCGGGAGAGGGTCAAGATGGTAAATTTGTTGTGGTGGATGAAGGGTTTGAGTTGGAGTTGGAGGATTTGCTTAGGGCGTCTGCGTATGTTGTTGGGAAGAGTAGGAGTGGGATTGTGTACAAGGTTGTCGGGGTCGGAAGAGGGTCTTCCTTGGCGGCGAATGCGGTGGCTGTTCGGCGACTCAGTGAGGGTGATGCCACGTGGCGATTTAAGGAGTTTGAGTCTGAAGTGGAGGCCATAGCAAGGGTTCGTCACCCCAATGTTGTTCCGTTGAGAGCTTATTATTATGCGCATGATGAGAAGCTGCTTATCACCGATTTCATTCGCAATGGAAGCTTGCACACTGCTTTACACGGTGGGCCTTCCAATTCATTGCCACCGTTATCATGGGCAGCACGGTTAAAAATTGCTCAAGAAGCAGCCAAGGGCTTGATGTACATACACGAGTTCAGTGGTCGCAAATATATCCACGGCAACATTAAGTCAGCAAAAATCTTACTAGACGATGAGCTCCATGCATACGTGTCAGGTTTTGGACTTTCTCGGCTTGGTTTGGGCCCGCCAAAGTCTACTACAATGGCTCCAAAACGGAACAGCTTGAACCAATCTTCTATAACCACTGCAATGAGTTCAAAGGTTGCAACTTCCTTTTACCACTACCTGGCACCCGAGGTGCGCATGGCTGGTGGCAAGTTCACTCAGAAATGTGATGTGTATTCATTTGGCATTGTCCTTTTGGAACTTTTGACGGGTAGGATGCCAGATTTTGGAGCAGAAAATGATGACAAGGTGCTGGAGAGTTTTGTGAGGAAAGCGTTCAAGGAGGAGCAGCCACTGTCTGATATCATTGACCAAGCACTCATCCCCGAAGTTTATGCTAAAAAGCAAGTCATTGCTGCATTCCATATTGCTCTGAACTGCACTGAACTCGATCCAGAGTTGCGACCAAGAATGAAAACCGTGTCAGAGAGCCTTGATAACATCAAATACAGTGAAAAACAAGAAAACTATGTATAG 1962 0.5209 MPMHHLLISLLLFFVLPPTTSLNSDGLSLLALKAAVDSDPTAVLSSWSENDATACHWPGVSCTGERVTQLSLPDKNLSGYIPSELGFLTSLKRLSLPHNNFSNAIPPSLFNATTLIVLDLSHNSLRGSLPSHFLSLKFLRHLDLSSNYLNGSLPSTLSDLTSLTGTLNLSFNLFSGGIPATLSNLPVAVSLDLRNNNLTGKIPQVGSLLNQGPTAFSGNPGLCGFPLQTACPEAQKPGIFANPEEGFPQNPNALHPEGSDQRLKPHGGGSVAVLVISGLSVAVGAVSLSLWVFRRRWGSGEEGKLGGQKLESEVDAGEGQDGKFVVVDEGFELELEDLLRASAYVVGKSRSGIVYKVVGVGRGSSLAANAVAVRRLSEGDATWRFKEFESEVEAIARVRHPNVVPLRAYYYAHDEKLLITDFIRNGSLHTALHGGPSNSLPPLSWAARLKIAQEAAKGLMYIHEFSGRKYIHGNIKSAKILLDDELHAYVSGFGLSRLGLGPPKSTTMAPKRNSLNQSSITTAMSSKVATSFYHYLAPEVRMAGGKFTQKCDVYSFGIVLLELLTGRMPDFGAENDDKVLESFVRKAFKEEQPLSDIIDQALIPEVYAKKQVIAAFHIALNCTELDPELRPRMKTVSESLDNIKYSEKQENYV* 654
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g01928 653 Gene3D Ribonuclease Inhibitor 27 136 IPR032675 -
Phac1g01928 653 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 11 646 IPR046959 -
Phac1g01928 653 FunFam Leucine-rich repeat receptor-like protein kinase 139 233 - -
Phac1g01928 653 Gene3D Ribonuclease Inhibitor 137 233 IPR032675 -
Phac1g01928 653 FunFam Leucine-rich repeat receptor-like kinase 27 138 - -
Phac1g01928 653 Pfam Leucine rich repeat N-terminal domain 23 62 IPR013210 -
Phac1g01928 653 SUPERFAMILY L domain-like 25 228 - -
Phac1g01928 653 Gene3D Phosphorylase Kinase; domain 1 324 422 - -
Phac1g01928 653 Pfam Protein tyrosine and serine/threonine kinase 346 640 IPR001245 GO:0004672|GO:0006468
Phac1g01928 653 SUPERFAMILY Protein kinase-like (PK-like) 345 640 IPR011009 -
Phac1g01928 653 Pfam Leucine rich repeat 90 149 IPR001611 GO:0005515
Phac1g01928 653 MobiDBLite consensus disorder prediction 243 262 - -
Phac1g01928 653 Gene3D Transferase(Phosphotransferase) domain 1 423 652 - -
Phac1g01928 653 ProSiteProfiles Protein kinase domain profile. 340 653 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g01928 Phac-Chr1 29038838 29042822 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g01928 22 644 Receptor kinase-like Gene Family AT3G57830 58.777 0.0 716
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Phac1g01928 PK_Tyr_Ser-Thr 7e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g01928 - - gmx:100796011 1097.03