Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g01920 ATGGAGCAAGCTCCGGTAGGATTACGCGGATCCGTGCACGACGGCGCCACACTCGAGTCAATTCAATTCAACGAAGAAATTCAGGGAATCATGGCGCCAGCACCGGCGCCGGAAAACGCCAACTCGTTCACCGCGCTGCTCGAGCTTCCGCCGACGCAGGCGGTGGAACTCCTTCACTCGCCGGACTCTGATGGAGCTCGGAAGCCGCCTAATTGCCACGTCAGCGCTAATCACAAACCCTATTTGCTCAACTCTTTCGGTGGCAATTTGACCTTTCCTTCCAACGCCGCCTTAATTGAACGCGCCGCCAAGCTCTCCGTCTTCGCCGGCGAAAACTCGTCGTCGCCGGGGGAGGCGCGTCTGCTTCCGGCTGGGTCTGGTTCGAATTTGGATAGGGTGAAGAACGAACCGCAAGAGACCGATTCGAACCCGTGCTCCACGCAAGGATGCGTTTCGGATCCTGCCGTTGAGAACAAGAACGAGAGGACCGCGAAGAGAAAGGAACGAGAGAAGAAAGTAACGGTTAAAGGATCGTCGAAGAAGAGTAAGAGCGTCGCCGATGAGACCTCCGGCGATGGTGAGAAGCTTCCCTACGTTCACGTTCGAGTTCGTCGAGGTCAAGCCACAGATAGCCATAGCTTGGCAGAAAGGGCTAGGAGAGAGAAGATCAATGCTCGCATGAAGCTTTTACAAGAGCTGGTCCCAGGCTGCGACAAGGTTGGTCTCTCTTCCTTTCTTGTTTTAATCTTAAAACCTTAA 759 0.5481 MEQAPVGLRGSVHDGATLESIQFNEEIQGIMAPAPAPENANSFTALLELPPTQAVELLHSPDSDGARKPPNCHVSANHKPYLLNSFGGNLTFPSNAALIERAAKLSVFAGENSSSPGEARLLPAGSGSNLDRVKNEPQETDSNPCSTQGCVSDPAVENKNERTAKRKEREKKVTVKGSSKKSKSVADETSGDGEKLPYVHVRVRRGQATDSHSLAERARREKINARMKLLQELVPGCDKVGLSSFLVLILKP* 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g01920 252 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 205 246 IPR036638 GO:0046983
Phac1g01920 252 MobiDBLite consensus disorder prediction 158 193 - -
Phac1g01920 252 Pfam Helix-loop-helix DNA-binding domain 211 235 IPR011598 GO:0046983
Phac1g01920 252 Gene3D - 199 244 IPR036638 GO:0046983
Phac1g01920 252 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 115 240 IPR024097 GO:0006355
Phac1g01920 252 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 207 252 IPR011598 GO:0046983
Phac1g01920 252 MobiDBLite consensus disorder prediction 139 154 - -
Phac1g01920 252 MobiDBLite consensus disorder prediction 110 193 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g01920 Phac-Chr1 28986292 28997515 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g01920 18 240 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G57800 53.846 5.14e-63 200
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Phac1g01920 HLH 7.8e-05 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g01920 - - vun:114168708 419.468