Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g01910 ATGGAAGAAACATACTCTATGCTGGAGGATGCAACAACTATGGAACCAACCATGTTAACCACTCAAGGCACGCCCAGGAATTGGAATCAAGACCCAGTGCTACTCCATCAACACCTTGTGTCTCCACAAATGGAAACCACTTCTCAAGGCTCAATCAACAATTCCACCTGCAGTTCATCCCTCCAATATGATGTGTTATCCCTTTTAGAGGGAATAACTAACGAAAAACACATAGAAGAAACCCTAATCCAATCCAAGCTATTCTCGTGCAATGTTGGGTCAATTGCAGCCACAGCAGCAACAGCAACAGCAACGATTATTAATGAGAGGGAACGAAGTGATTGTGAGGAGAATGATCGAAGACAGCGTGAAGCATGTCTTGATTTGGTTGCAAAAACAATTGGTAGCAAGAGCTCTGTGTATCGAGGAGTAATCAAGTGCAACGATGATCGTTTCGAAGCATTTGTGTGGGATAACAGCAATCCAGGGGAAAGAGGAAGAACAGTTTATATTGGTGCTTACTCAAATGAAGTCGACGCCGCCAAAGCTCATGATTTAGTGTCAATCAGAATAGGGGGCTTAAAAGCATTAACGAATTTTCATGTGAGATGTTATTCCAAGGACATGGATGAAATGCGAAGAATGAGCAAATGGGACTATATTTGTGCTGTTAGAGGGTTGGGCAAGGGCTATACAGACGCTGATTCCCCTTTCCGTGGCGTCTACAGGGTTCCGACAAGCAGGAAATGGGAAGCAAGGCTCGGTCGTGAAGGGTCACCAACCATACACTTGGGAACTTATTACACTGCAGAGGATGCAGCGAGAGCTTATGACATCATATCAATAAAACTGAAGGGAGGGGAAGCAATTACCAACTTTGAATGGAATTCCTACGAAACTGAGGGCATAATGGAGTGTGTGATTACTCAAGCAACGGATGGATCGATTATTCTGCAGAAAGAAGGAAACAACAAACAAACCGAAGCATCTCCTCAAAACAGCTCTTCAGTCCAATGCCATCCTCAACCACCGAGCAACCCATCCTTTTGTCGTTGCTGCAACAGCCAAATTCTCACACCAAGCAACCCTCATGCTCTTGGTGCCTTTGCTGATACTGCTGGAAATAGTGGAAGTGACAATTCAACTGGTAACGATGCTGTACGGTTTCGAAATGAGAATGCAACACAGCAACAGCCACTTCAGACGCAGAGGCAAGTGAGTTTTACCGAGGGCTTTAATCAGAACCTTGTCAACAACAACAACAATCAGCTTCCAAATCATAATGCAACACAGCAACAATCACTTCAGACTCCAAGGCAAGTGAGTTTTAACTATGGCTTTAATCAGAATCTTGTAAACAACAACTACAACAACTACAACAACAGTAACCAATTTCTGCCTCAGAGTTCTAACCTTGCTTTGCCTGCTCCTGGCATCCGAAATCTAGAGTTAGAAAAGTGTGTCCGTTTCCCTGATTGGCGATCAGGTTTCGGAAAGAAGTTACTAGGGGGGGACTTGGAATTGGAACCTTTAAGCAGTATTTCTGCCCTCAGTGTGCAACCTCTACCACAAGTCACTCTGAATGGAAGTACAGGATCAACACAGCTACACTCACCTGCATTGCACCAGAGTTATGAGCATCAAAACTTGAACTCCTTCTCCTCTGATAGTTTTCAGAATCCTATTTCTGAACCAAACAACAACGGCTTCCAAAGTCAAATTGATTTGGACATCAGAGATTATCTCAACAGGTCTTATATAGAAGACACTGATTTCACATGTGATTATGACATGTTTTCAGCCATGAATGGGGGTAGATAA 1821 0.4349 MEETYSMLEDATTMEPTMLTTQGTPRNWNQDPVLLHQHLVSPQMETTSQGSINNSTCSSSLQYDVLSLLEGITNEKHIEETLIQSKLFSCNVGSIAATAATATATIINERERSDCEENDRRQREACLDLVAKTIGSKSSVYRGVIKCNDDRFEAFVWDNSNPGERGRTVYIGAYSNEVDAAKAHDLVSIRIGGLKALTNFHVRCYSKDMDEMRRMSKWDYICAVRGLGKGYTDADSPFRGVYRVPTSRKWEARLGREGSPTIHLGTYYTAEDAARAYDIISIKLKGGEAITNFEWNSYETEGIMECVITQATDGSIILQKEGNNKQTEASPQNSSSVQCHPQPPSNPSFCRCCNSQILTPSNPHALGAFADTAGNSGSDNSTGNDAVRFRNENATQQQPLQTQRQVSFTEGFNQNLVNNNNNQLPNHNATQQQSLQTPRQVSFNYGFNQNLVNNNYNNYNNSNQFLPQSSNLALPAPGIRNLELEKCVRFPDWRSGFGKKLLGGDLELEPLSSISALSVQPLPQVTLNGSTGSTQLHSPALHQSYEHQNLNSFSSDSFQNPISEPNNNGFQSQIDLDIRDYLNRSYIEDTDFTCDYDMFSAMNGGR* 607
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g01910 606 ProSiteProfiles AP2/ERF domain profile. 237 294 IPR001471 GO:0003700|GO:0006355
Phac1g01910 606 ProSiteProfiles AP2/ERF domain profile. 140 201 IPR001471 GO:0003700|GO:0006355
Phac1g01910 606 Gene3D AP2/ERF domain 140 203 IPR036955 GO:0003700|GO:0006355
Phac1g01910 606 Gene3D AP2/ERF domain 237 295 IPR036955 GO:0003700|GO:0006355
Phac1g01910 606 MobiDBLite consensus disorder prediction 414 436 - -
Phac1g01910 606 SUPERFAMILY DNA-binding domain 237 295 IPR016177 GO:0003677
Phac1g01910 606 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 104 398 - -
Phac1g01910 606 Pfam AP2 domain 238 286 IPR001471 GO:0003700|GO:0006355
Phac1g01910 606 CDD AP2 238 296 IPR001471 GO:0003700|GO:0006355
Phac1g01910 606 SUPERFAMILY DNA-binding domain 139 202 IPR016177 GO:0003677
Phac1g01910 606 SMART rav1_2 237 300 IPR001471 GO:0003700|GO:0006355
Phac1g01910 606 SMART rav1_2 140 207 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g01910 Phac-Chr1 28911437 28915148 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g01910 94 306 AP2-EREBP Transcription Factor Family AT1G51190 36.530 2.24e-39 150
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Phac1g01910 AP2 1.5e-05 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g01910 - K09285 pvu:PHAVU_001G137500g 1095.49