Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g01907 ATGGCGCAGAAGAAGAAAGCTAGGGTTTCTGACGACGAGGAAATGAAAGGGCAGCGTGATGAAACCAGCCTCTACCAGGTTCTTGGTGTGGAGAGAACCGCGTCTCAGCAGGAAATAAAGAAGGCTTACTACAAGTTGGCGTTGAGGCTCCATCCTGATAAGAACCCTGGTGATGAGGAAGCTAAAGAGAAATTTCAGCAACTGCAAAAGGTGATATCGATTCTCGGGGATGAAGAGAAGCGGACACTTTATGATCAAACTGGATGTGTTGATGATGATGACCTTGCTGGAGATGCTGTTCAGAATCTTCAAGAGTTCTTCAGAACAATGTACAAGAAGGTCACGGAAGCTGATATTGAGGAGTTTCAAGCAAACTATAGAGGATCTGACTCGGAGAAAAGTGATTTGATTGATTTGTACAAAAAGTGCAAGGGTAACATGAATAGGCTTTTTTGTTCAATGCTTTGTTCAGATCCTAAACTTGATTCACACCGATTCAAGGATATTCTCGATGAGGCTATAGCTGCTGGAGAACTAAAGGCAACAAAAGCCTACCAGAAATGGGCCAAGGAAGTATCTGAAACCAAACCGCCCTCAAATCCTTTGAGAAGGAGGGAAAAGTCTAATAAGCAGTCAGAAACAGATCTGCATGCAATGATAGCACAACGCCAAAATGAGAGGAAAGGCCAGTTTGATTCAATGTTCTCATCTCTAGTTTCAAAATATGGTGGAGGTGATATGCCGGAACCCTCTGAAGAGGAGTTTGAAGCTACACGGAGAAAGCTAGAGACTGGTAGATCCTCTAAAAACTCAAAACAATCCAAACGGAAGTAA 834 0.4305 MAQKKKARVSDDEEMKGQRDETSLYQVLGVERTASQQEIKKAYYKLALRLHPDKNPGDEEAKEKFQQLQKVISILGDEEKRTLYDQTGCVDDDDLAGDAVQNLQEFFRTMYKKVTEADIEEFQANYRGSDSEKSDLIDLYKKCKGNMNRLFCSMLCSDPKLDSHRFKDILDEAIAAGELKATKAYQKWAKEVSETKPPSNPLRRREKSNKQSETDLHAMIAQRQNERKGQFDSMFSSLVSKYGGGDMPEPSEEEFEATRRKLETGRSSKNSKQSKRK* 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g01907 277 CDD DnaJ 25 77 IPR001623 -
Phac1g01907 277 ProSiteProfiles dnaJ domain profile. 23 88 IPR001623 -
Phac1g01907 277 MobiDBLite consensus disorder prediction 1 20 - -
Phac1g01907 277 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN-RELATED 12 273 IPR042977 -
Phac1g01907 277 SUPERFAMILY Chaperone J-domain 20 103 IPR036869 -
Phac1g01907 277 PRINTS DnaJ domain signature 80 99 IPR001623 -
Phac1g01907 277 PRINTS DnaJ domain signature 43 58 IPR001623 -
Phac1g01907 277 PRINTS DnaJ domain signature 60 80 IPR001623 -
Phac1g01907 277 PRINTS DnaJ domain signature 25 43 IPR001623 -
Phac1g01907 277 Pfam DnaJ domain 24 85 IPR001623 -
Phac1g01907 277 SMART dnaj_3 22 80 IPR001623 -
Phac1g01907 277 MobiDBLite consensus disorder prediction 252 270 - -
Phac1g01907 277 Gene3D DnaJ domain 7 121 IPR036869 -
Phac1g01907 277 MobiDBLite consensus disorder prediction 197 213 - -
Phac1g01907 277 MobiDBLite consensus disorder prediction 190 277 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g01907 Phac-Chr1 28867289 28870262 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g01907 25 85 C2H2 Transcription Factor Family AT1G74250 37.879 1.34e-07 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g01907 K09529 - gmx:100793909 491.115
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac1g01907 1 28867289 28870262 Phac1g01907 1 28867289 28870262 ECH