Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g01905 ATGGAGACAGAGAACGGTGACACGAAGTCCAAAAAGATGGAAGACTATGAAGTGATAGAGCAAATAGGAAGAGGGGCTTTTGGCTCTGCCTTCCTCGTTCTTCACAAGTCCGAGAAAAAGAGGTATGTGCTGAAAAAGATTCGGTTGGCCAAACAGACAGAGAAGTTCAAACGTACTGCACACCAAGAGATGAACCTGATTGCAAAACTGAATAACCCATACATTGTGGAGTACAAAGATGCTTGGGTGGAGAAGGAGGATCACATATGCATTATAACTGGCTATTGTGAAGGAGGTGACATGGCAGATAACATAAAGAAAGCTCGAGGGTCATTTTTTCCTGAGGAGAAAGTCTGCAAATGGCTGACTCAGTTGTTGATAGCTGTGGACTACTTGCACTCTAATCGTGTAATCCACAGAGATCTTAAGTGTTCCAACATATTCCTCACCAAAGACAACAACATTCGGCTCGGTGACTTTGGTCTTGCAAAGCGACTTAATGCAGAAGACCTTACTTCCTCGGTTGTTGGAACTCCAAATTACATGTGTCCTGAGCTCCTGGCTGATATACCTTATGGTTATAAATCAGATATGTGGTCTCTTGGTTGCTGCATGTTTGAGATTGCTGGACATCAACCAGCATTTCGTGCTCCAGACATGGCTGGACTTATCAATAAAATAAACAGATCCTGCATTTCTCCACTGCCAATTGTTTATTCTTCCACACTGAAACAACTTATCAAGAGCATGCTTAGGAAAAACCCTGAGCATAGGCCAACCGCAGCTGAATTGTTAAGGCATCCGCTTTTACAACCTTATGTTCTTCGTTGTCATAATGCATCATCTAATATTCTTCCAGTATATCCTCTCGTTAATTCAAAGGATAAATCAAAAAGATCTAATAAATCTAGTGGTGGCAAGGACCATAAGGACAAAGAAGCAAGCTTAGTAAATCGTTTGGAACGAATTCATCCAATTGAGGGAAATGGAGATATACACGTAAGCAATCTTCCTAATGATGCTGTTACAATCTCAACCAGTGCAGAAGACAATATTGAAACCAGGATGGTTGATCTTACCAGCTACATAGTGGAATCTTCTACTAGTATTAGTGGCTCAAAAGATGGGTCAACAACATCTGAATCAACTATTTGCAGTGTGTGCAAGGAGGACTTTAAAAGTAGACCTGCAAGGGAAACGGCTAACAACGAAATCTCTTTAAAGGGTACACAAGAATCTCCGCATGAGGAACAAATATTTGCAGCTAAACATTTTCATAATTTAGAAGATGACATTAATGCAGTGAGCGCAGAAGTTGAAGATGGTTCTTGCAATGAAGGTTTGGATAATGCTGAAGCACGGAGGGAAGATTCGAACCTTGACATCTCTGGTAAATTAACAATGTCCAGTGCAGGCAGTAGCAGCCCTGATAAAGATAAGTCCGTCAACGAGGAAAAACCATCACTAACTGTGAATCCTATTAGGGTTGGACATGATACCGAATCTGGAAACCACTTGAATGTATTTACAGAAGGGTCACATATGAACTGCTTGACATCTGATTGTAATGATGCACTTGTAGTGAAGGATGATGACACAGCTAACAGACACATTCTCTCCACGCATAAAGATGATAACACGGTGGAGGTTGATCAGAAAAGTAGCGTTTCATTGAGTGTAATAACAGAAGTCGATGGTGATGAGACAATCACGACTCTGTTGGATAGTCCCTGCCAGCAAAGAGCTGATGCTTTGGAATCTCTGCTCGAATTATGTGCTCAGCTACTCAAGCAAGATAAACTTGAAGAGCTTTCTGGGGTTCTGAGACCATTTGGAAAAGAAGCTGTATCATCAAGAGAAACAGCAATATGGCTGGCAAAAAGCCTCATGTCTGCCCAAAAATTTAATCCCGAAACCTAG 1920 0.4135 METENGDTKSKKMEDYEVIEQIGRGAFGSAFLVLHKSEKKRYVLKKIRLAKQTEKFKRTAHQEMNLIAKLNNPYIVEYKDAWVEKEDHICIITGYCEGGDMADNIKKARGSFFPEEKVCKWLTQLLIAVDYLHSNRVIHRDLKCSNIFLTKDNNIRLGDFGLAKRLNAEDLTSSVVGTPNYMCPELLADIPYGYKSDMWSLGCCMFEIAGHQPAFRAPDMAGLINKINRSCISPLPIVYSSTLKQLIKSMLRKNPEHRPTAAELLRHPLLQPYVLRCHNASSNILPVYPLVNSKDKSKRSNKSSGGKDHKDKEASLVNRLERIHPIEGNGDIHVSNLPNDAVTISTSAEDNIETRMVDLTSYIVESSTSISGSKDGSTTSESTICSVCKEDFKSRPARETANNEISLKGTQESPHEEQIFAAKHFHNLEDDINAVSAEVEDGSCNEGLDNAEARREDSNLDISGKLTMSSAGSSSPDKDKSVNEEKPSLTVNPIRVGHDTESGNHLNVFTEGSHMNCLTSDCNDALVVKDDDTANRHILSTHKDDNTVEVDQKSSVSLSVITEVDGDETITTLLDSPCQQRADALESLLELCAQLLKQDKLEELSGVLRPFGKEAVSSRETAIWLAKSLMSAQKFNPET* 640
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g01905 639 CDD STKc_Nek 15 270 - -
Phac1g01905 639 PANTHER SERINE/THREONINE-PROTEIN KINASE NEK 13 590 - -
Phac1g01905 639 SMART serkin_6 16 270 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac1g01905 639 ProSiteProfiles Protein kinase domain profile. 16 270 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac1g01905 639 MobiDBLite consensus disorder prediction 447 461 - -
Phac1g01905 639 MobiDBLite consensus disorder prediction 462 477 - -
Phac1g01905 639 FunFam serine/threonine-protein kinase Nek6 isoform X2 96 284 - -
Phac1g01905 639 ProSitePatterns Serine/Threonine protein kinases active-site signature. 137 149 IPR008271 GO:0004672|GO:0006468
Phac1g01905 639 FunFam Serine/threonine-protein kinase Nek6 1 95 - -
Phac1g01905 639 Gene3D Transferase(Phosphotransferase) domain 1 98 325 - -
Phac1g01905 639 Pfam Protein kinase domain 16 269 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac1g01905 639 MobiDBLite consensus disorder prediction 295 316 - -
Phac1g01905 639 ProSitePatterns Protein kinases ATP-binding region signature. 22 45 IPR017441 GO:0005524
Phac1g01905 639 Gene3D Phosphorylase Kinase; domain 1 1 95 - -
Phac1g01905 639 MobiDBLite consensus disorder prediction 442 499 - -
Phac1g01905 639 MobiDBLite consensus disorder prediction 294 316 - -
Phac1g01905 639 SUPERFAMILY Protein kinase-like (PK-like) 13 298 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g01905 Phac-Chr1 28858465 28864622 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g01905 9 271 MAP Kinase Kinase Kinase AT3G13530 33.208 3.16e-38 150
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK NEK Phac1g01905 Pkinase 6.7e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g01905 K08857 - gmx:100793379 1105.89