Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g01901 ATGGCTGACCCCTACTCCAATTTTTTCTCATCCTCACCCTTCTTCCGCTTCAATCACCATTTCCCATCTTCAAACCCTTCTCCTCACGCTCCCTATGTCCACAACTTCATCAACCACTCCAAAACCAACGACACCACCTTTTTCCAATACCACCACCACAACCATACTTCTTCCACAACTACTACTTTTTCTTCTTTTCCTCCTTCCCCTCCTTTGAGAGAAGAACTACCCCTCTTGAGACTCAGTCCGGCCAAGCAAGAGGAAGAGGAGGAGGACCTCTCTTGTACTGGACCCATGGATGTGGAGGAGAGGATCCACATCCACCCCAAAGAGGAAGAAGATGATGAAGATGGCACTGTCACTGTTGCACTCCACATAGGGTTGCCAAGCCCTAGTGCTGCTGAGATGGCTTCTGTGCTCTCTTCTTCCTCAGAGACCACTGACAAAGATCATGGAGATGGTGCTGCTGAGGATTCTTCTGCTGGCTTCAGACTCAACAAGGGCCAGTACTGGATCCCTACCCCTTCTCAGATTCTCATTGGCCCTACTCAGTTCTCTTGCCCTGTTTGCTGCAAAACTTTCAACAGATACAACAACATGCAGATGCACATGTGGGGGCATGGATCACAGTACAGAAAAGGACCTGAATCTCTGAGGGGTACCCAACCAACGGGCATGCTGAGGCTTCCTTGCTATTGTTGTGCCCCAGGGTGCAGAAACAACATTGATCACCCAAGATCAAAGCCTCTCAAAGACTTTAGAACACTTCAAACGCATTACAAAAGGAAGCATGGGATTAAACCTTTCATGTGCAGGAAATGCGGCAAGGCTTTTGCGGTGAGGGGAGATTGGAGGACTCATGAGAAGAACTGTGGCAAGCTTTGGTACTGCATCTGCGGCTCCGATTTCAAGCACAAGAGATCTCTTAAAGACCATATTAAAGCTTTTGGAAGTGGCCATGCAGCCTATGGAATCGATGGTTTTGAAGAAGAAGATGAGCCGGCATCTGAAGTAGAGCAAGATAATGATGATTCCACCCAGTGA 1044 0.4818 MADPYSNFFSSSPFFRFNHHFPSSNPSPHAPYVHNFINHSKTNDTTFFQYHHHNHTSSTTTTFSSFPPSPPLREELPLLRLSPAKQEEEEEDLSCTGPMDVEERIHIHPKEEEDDEDGTVTVALHIGLPSPSAAEMASVLSSSSETTDKDHGDGAAEDSSAGFRLNKGQYWIPTPSQILIGPTQFSCPVCCKTFNRYNNMQMHMWGHGSQYRKGPESLRGTQPTGMLRLPCYCCAPGCRNNIDHPRSKPLKDFRTLQTHYKRKHGIKPFMCRKCGKAFAVRGDWRTHEKNCGKLWYCICGSDFKHKRSLKDHIKAFGSGHAAYGIDGFEEEDEPASEVEQDNDDSTQ* 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g01901 347 MobiDBLite consensus disorder prediction 133 160 - -
Phac1g01901 347 ProSitePatterns Zinc finger C2H2 type domain signature. 187 207 IPR013087 -
Phac1g01901 347 ProSiteProfiles Zinc finger C2H2 type domain profile. 269 289 IPR013087 -
Phac1g01901 347 Gene3D Classic Zinc Finger 247 322 - -
Phac1g01901 347 PANTHER ZINC FINGER PROTEIN WIP2 40 343 IPR043584 GO:0003700|GO:0010468
Phac1g01901 347 FunFam Zinc finger protein WIP2 238 320 - -
Phac1g01901 347 SUPERFAMILY beta-beta-alpha zinc fingers 250 289 IPR036236 -
Phac1g01901 347 Gene3D Classic Zinc Finger 184 207 - -
Phac1g01901 347 ProSiteProfiles Zinc finger C2H2 type domain profile. 185 212 IPR013087 -
Phac1g01901 347 SMART c2h2final6 185 207 IPR013087 -
Phac1g01901 347 SMART c2h2final6 269 289 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g01901 Phac-Chr1 28788405 28791327 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g01901 1 344 C2H2 Transcription Factor Family AT3G57670 61.658 1.64e-145 414
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Phac1g01901 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g01901 - - gmx:100802907 583.563