Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g01863 ATGGAAGCTCTATGCTTGTTACACATTCTCCTAGCTTGGTGTCTGTCATGTTTTGAGCTTGTTGGTGCTGAGCTTCAGGAGCAAGCTGTATTACAGGCCATCAACCAAGAGCTTAGAGTCCCTGGATGGGGGGATGCCAACAACTCAGATTACTGCAGTTGGCAAGGTGTCAACTGTGGTAACCACTCATTGGTGGAGAGCTTGGATCTGTCTCACCGGAATCTTCGAGGTAATGTAACTTTAATGTCTGAGCTCAAAGCATTGATGCGGCTTGATCTTTCAAATAATAACTTTGATGGATTGATTCCACGTGCTTTTGGAAATTTATCTGATCTTGAAATTTTAGATTTGTCTTCAAATAAGTTCCAGGGTTCAATTCCACCTCAGTTGGGTGGTCTCAGAAACCTCAAATCATTGAACCTTTCCAATAATGTGCTTGTGGGAGAAATACCAATGGAACTTCAGGGCTTAGAGAAATTGCAAGATTTTCAAATTTCTAGTAACCATTTGAGTGGTCTTATACCTTCGTGGGTGGGAAATTTAACTAATCTGAGGCTTTTCACTGCTTATGAGAACCGTTTAGATGGCAGGATTCCTGATGATCTAGGCTCAATTTCTGAGCTTCAAATACTTAACTTGCACTCTAACCAGCTTGAAGGTCCAATACCAGCTACCATTTTCGTTCCAGGGAAGCTGGAAGTTCTGGTTCTCACCCAGAATAATTTTAGTGGCGAACTGCCTAAGGAAATTGGGAATTGCAAAGCCCTTTCCAGCGTTCGAATTGGAAACAACCATCTAGTAGAATTTTCTAAGTGTTCTAATCTTACCCTCTTGAATTTGGCTTCAAATGGATTTACTGGAACAATTCCGCAAGACTTCGGACAACTTATGAATCTTCAGGAATTAATTCTTTCTGGAAATAGCCTATTTGGCGATATTCCAATATCAATTCTGAGTTGCAAAAATCTTAACAAGCTTGATATTAGCAACAACAGATTCAATGGGACAATACCAAATGAAATCTGCAATATCACCCGGTTGCAGTACTTGCTGTTGGATCAGAATTTCATAAGAGGAGAGATCCCCCATGAAATTGGTAATTGTGCAAAACTTCTTGAATTACAATTGGGCAGTAATATTTTGACTGGAACTATTCCTCCTGAGATTGGGCGCATTAGGAACTTGCAGATAGCTTTAAATTTGAGCTTCAATCATCTTCATGGACTTCTGCCCCCTGAATTGGGAAAACTGGACAAACTTGTTTCACTGGATGTTTCAAACAATCGGCTATCAGGTAATATCCCACCTGAACTTAAGGGAATGTTGAGTTTGATAGAGGTGAACTTCTCAAATAATCTGCTAGGAGGCTTGGTGCCAACATTTGTACCATTCCAAAAGAGTCCTAGTTCAAGTTTTCTGGGCAACAAAGGGCTTTGTGGAGAGCCTCTGAACCCTTCATGTGGAACCCTTTATGATGATCACAAGGCTTACCATCATCGGGTTTCTTACAGAATCATACTAGCTGTAATTGGTTCTGGTTTGGCTGTTTTTATGTCAGTAACTATAGTTGTCTTGCTGTTTATGATCAGAGAGAGGCAAGAAAAAGTAGCCAAAGATGCTGGAATTGTTGATGATAGCACCAATGACAACCCAACTATAATTGCAGGAACTGTTTTTGTTGATAATCTCAAACAAGCAGTAGACCTTGATGCTGTCGTTAAAGCAACTCTGAAAGACTCTAATAAGCTCAGCGGCGGAACTTTCAGCACAGTTTACAAGGCAATCATGCCTTCTGGGGTGGTCTTATCTGTTAGGAGATTGAAGTCTGTAGACAAGACAATAATCCACCACCAGAACAAAATGATTAGAGAACTTGAAAGACTGAGCAAAGTTTGTCATGATAATCTTGTGCGTCCCATTGGCTATGTCATTTATGAAGATGTTGCTCTTCTCTTGCATCATTATTTTCCCAATGGAACATTGGTTCAGCTTCTTCATGAATCTACCCGGAAACCTGAATATCAACCTGACTGGCCTTCTAGACTGTCCATTGCCATTGGTGTGGCAGAAGGTTTGGCTTTCCTTCATCATGTGGCAATCATCCATCTTGACATTTCTTCAGGCAATGTTCTCTTGGATGCAAATTTCAAGCCGTTAGTTGGGGAGATAGAGATTTCAAAACTTCTGGATCCAACCAAAGGCACTGCAAGTATTAGTGCAGTTGCTGGTTCCTTTGGTTACATACCACCAGAATATGCATATACTATGCAAGTAACAGCACCAGGAAATGTTTATAGCTACGGTGTTGTTCTGTTGGAGATCCTCACAACTAGATTACCAGTTGATGAGGATTTTGGTGAAGGTGTAGATTTGGTGAAATGGGTTCACAGTGCTCCAGTGAGAGGGGAAACTCCAGAGCAGATATTGGATGCCAGGCTTAGCACAGTTTCTTTTGGTTGGAGGAAAGAAATGCTTGCTGCTTTGAAGGTTGCCTTGCTGTGCACGGACAACACACCAGCCAAACGACCGAAAATGAAGAATGTAGTGGAAATGCTGCGAGAGATAAAACAAAACTGA 2577 0.4117 MEALCLLHILLAWCLSCFELVGAELQEQAVLQAINQELRVPGWGDANNSDYCSWQGVNCGNHSLVESLDLSHRNLRGNVTLMSELKALMRLDLSNNNFDGLIPRAFGNLSDLEILDLSSNKFQGSIPPQLGGLRNLKSLNLSNNVLVGEIPMELQGLEKLQDFQISSNHLSGLIPSWVGNLTNLRLFTAYENRLDGRIPDDLGSISELQILNLHSNQLEGPIPATIFVPGKLEVLVLTQNNFSGELPKEIGNCKALSSVRIGNNHLVEFSKCSNLTLLNLASNGFTGTIPQDFGQLMNLQELILSGNSLFGDIPISILSCKNLNKLDISNNRFNGTIPNEICNITRLQYLLLDQNFIRGEIPHEIGNCAKLLELQLGSNILTGTIPPEIGRIRNLQIALNLSFNHLHGLLPPELGKLDKLVSLDVSNNRLSGNIPPELKGMLSLIEVNFSNNLLGGLVPTFVPFQKSPSSSFLGNKGLCGEPLNPSCGTLYDDHKAYHHRVSYRIILAVIGSGLAVFMSVTIVVLLFMIRERQEKVAKDAGIVDDSTNDNPTIIAGTVFVDNLKQAVDLDAVVKATLKDSNKLSGGTFSTVYKAIMPSGVVLSVRRLKSVDKTIIHHQNKMIRELERLSKVCHDNLVRPIGYVIYEDVALLLHHYFPNGTLVQLLHESTRKPEYQPDWPSRLSIAIGVAEGLAFLHHVAIIHLDISSGNVLLDANFKPLVGEIEISKLLDPTKGTASISAVAGSFGYIPPEYAYTMQVTAPGNVYSYGVVLLEILTTRLPVDEDFGEGVDLVKWVHSAPVRGETPEQILDARLSTVSFGWRKEMLAALKVALLCTDNTPAKRPKMKNVVEMLREIKQN* 859
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g01863 858 SUPERFAMILY Protein kinase-like (PK-like) 577 855 IPR011009 -
Phac1g01863 858 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 12 854 - -
Phac1g01863 858 Gene3D Ribonuclease Inhibitor 176 227 IPR032675 -
Phac1g01863 858 SMART LRR_typ_2 205 229 IPR003591 -
Phac1g01863 858 SMART LRR_typ_2 157 180 IPR003591 -
Phac1g01863 858 SMART LRR_typ_2 296 320 IPR003591 -
Phac1g01863 858 SMART LRR_typ_2 109 133 IPR003591 -
Phac1g01863 858 SMART LRR_typ_2 417 440 IPR003591 -
Phac1g01863 858 SMART LRR_typ_2 344 368 IPR003591 -
Phac1g01863 858 SMART LRR_typ_2 85 108 IPR003591 -
Phac1g01863 858 FunFam MDIS1-interacting receptor like kinase 2 isoform A 173 268 - -
Phac1g01863 858 ProSiteProfiles Protein kinase domain profile. 577 858 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac1g01863 858 SUPERFAMILY L domain-like 50 224 - -
Phac1g01863 858 Gene3D Phosphorylase Kinase; domain 1 545 655 - -
Phac1g01863 858 ProSitePatterns Tyrosine protein kinases specific active-site signature. 700 712 IPR008266 GO:0004672|GO:0006468
Phac1g01863 858 Pfam Leucine rich repeat 87 146 IPR001611 GO:0005515
Phac1g01863 858 PRINTS Leucine-rich repeat signature 88 101 - -
Phac1g01863 858 PRINTS Leucine-rich repeat signature 133 146 - -
Phac1g01863 858 Gene3D Transferase(Phosphotransferase) domain 1 656 858 - -
Phac1g01863 858 FunFam Leucine-rich repeat receptor-like tyrosine-protein kinase PXC3 656 858 - -
Phac1g01863 858 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 25 172 - -
Phac1g01863 858 Pfam Protein tyrosine and serine/threonine kinase 580 852 IPR001245 GO:0004672|GO:0006468
Phac1g01863 858 FunFam Leucine-rich repeat receptor-like tyrosine-protein kinase PXC3 547 655 - -
Phac1g01863 858 Gene3D Ribonuclease Inhibitor 25 175 IPR032675 -
Phac1g01863 858 SUPERFAMILY RNI-like 165 459 - -
Phac1g01863 858 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 269 490 - -
Phac1g01863 858 Gene3D Ribonuclease Inhibitor 228 489 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g01863 Phac-Chr1 28397126 28400559 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g01863 1 857 Receptor kinase-like Gene Family AT2G41820 70.529 0.0 1240
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Phac1g01863 PK_Tyr_Ser-Thr 5.4e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g01863 - - gmx:100789684 1547.72
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac1g01863 1 28397126 28400559 Phac1g01863 1 28397126 28400559 ECH