Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g01862 ATGGAAGCTCTATGCTTGTTACACATTCTCCTAGCTTGGTGTCTGTCATGTTTTGAGCTTGTTGGTGCTGAGCTTCAGGAGCAAGCTGTATTACAGGCCATCAACCAAGAGCTTAGAGTCCCTGGATGGGGGGATGCCAACAACTCAGATTACTGCAGTTGGCAAGGTGTCAACTGTGGTAACCACTCATTGGTGGAGAGCTTGGATCTGTCTCACCGGAATCTTCGAGGTAATGTAACTTTAATGTCTGAGCTCAAAGCATTGATGCGGCTTGATCTTTCAAATAATAACTTTGATGGATTGATTCCACGTGCTTTTGGAAATTTATCTGATCTTGAAATTTTAGATTTGTCTTCAAATAAGTTCCAGGGTTCAATTCCACCTCAGTTGGGTGGTCTCAGAAACCTCAAATCATTGAACCTTTCCAATAATGTGCTTGTGGGAGAAATACCAATGGAACTTCAGGGCTTAGAGAAATTGCAAGATTTTCAAATTTCTAGTAACCATTTGAGTGGTCTTATACCTTCGTGGGTGGGAAATTTAACTAATCTGAGGCTTTTCACTGCTTATGAGAACCGTTTAGATGGCAGGATTCCTGATGATCTAGGCTCAATTTCTGAGCTTCAAATACTTAACTTGCACTCTAACCAGCTTGAAGGTCCAATACCAGCTACCATTTTCGTTCCAGGGAAGCTGGAAGTTCTGGTTCTCACCCAGAATAATTTTAGTGGCGAACTGCCTAAGGAAATTGGGAATTGCAAAGCCCTTTCCAGCGTTCGAATTGGAAACAACCATCTAGTAGGTACAATTCCTAAGACCATTGGAAATCTTACTAGCCTAACCTACTTTGAAGCTGACAATAATAATCTTTCTGGTGAGGTTGTGTCAGAATTTTCTAAGTGTTCTAATCTTACCCTCTTGAATTTGGCTTCAAATGGATTTACTGGAACAATTCCGCAAGACTTCGGACAACTTATGAATCTTCAGGAATTAATTCTTTCTGGAAATAGCCTATTTGGCGATATTCCAATATCAATTCTGAGTTGCAAAAATCTTAACAAGCTTGATATTAGCAACAACAGATTCAATGGGACAATACCAAATGAAATCTGCAATATCACCCGGTTGCAGTACTTGCTGTTGGATCAGAATTTCATAAGAGGAGAGATCCCCCATGAAATTGGTAATTGTGCAAAACTTCTTGAATTACAATTGGGCAGTAATATTTTGACTGGAACTATTCCTCCTGAGATTGGGCGCATTAGGAACTTGCAGATAGCTTTAAATTTGAGCTTCAATCATCTTCATGGACTTCTGCCCCCTGAATTGGGAAAACTGGACAAACTTGTTTCACTGGATGTTTCAAACAATCGGCTATCAGGTAATATCCCACCTGAACTTAAGGGAATGTTGAGTTTGATAGAGGTGAACTTCTCAAATAATCTGCTAGGAGGCTTGGTGCCAACATTTGTACCATTCCAAAAGAGTCCTAGTTCAAGTTTTCTGGGCAACAAAGGGCTTTGTGGAGAGCCTCTGAACCCTTCATGTGGAACCCTTTATGATGATCACAAGGCTTACCATCATCGGGTTTCTTACAGAATCATACTAGCTGTAATTGGTTCTGGTTTGGCTGTTTTTATGTCAGTAACTATAGTTGTCTTGCTGTTTATGATCAGAGAGAGGCAAGAAAAAGTAGCCAAAGATGCTGGAATTGTTGATGATAGCACCAATGACAACCCAACTATAATTGCAGGAACTGTTTTTGTTGATAATCTCAAACAAGCAGTAGACCTTGATGCTGTCGTTAAAGCAACTCTGAAAGACTCTAATAAGCTCAGCGGCGGAACTTTCAGCACAGTTTACAAGGCAATCATGCCTTCTGGGGTGGTCTTATCTGTTAGGAGATTGAAGTCTGTAGACAAGACAATAATCCACCACCAGAACAAAATGATTAGAGAACTTGAAAGACTGAGCAAAGTTTGTCATGATAATCTTGTGCGTCCCATTGGCTATGTCATTTATGAAGATGTTGCTCTTCTCTTGCATCATTATTTTCCCAATGGAACATTGGTTCAGCTTCTTCATGAATCTACCCGGAAACCTGAATATCAACCTGACTGGCCTTCTAGACTGTCCATTGCCATTGGTGTGGCAGAAGGTTTGGCTTTCCTTCATCATGTGGCAATCATCCATCTTGACATTTCTTCAGGCAATGTTCTCTTGGATGCAAATTTCAAGCCGTTAGTTGGGGAGATAGAGATTTCAAAACTTCTGGATCCAACCAAAGGCACTGCAAGTATTAGTGCAGTTGCTGGTTCCTTTGGTTACATACCACCAGAATATGCATATACTATGCAAGTAACAGCACCAGGAAATGTTTATAGCTACGGTGTTGTTCTGTTGGAGATCCTCACAACTAGATTACCAGTTGATGAGGATTTTGGTGAAGGTGTAGATTTGGTGAAATGGGTTCACAGTGCTCCAGTGAGAGGGGAAACTCCAGAGCAGATATTGGATGCCAGGCTTAGCACAGTTTCTTTTGGTTGGAGGAAAGAAATGCTTGCTGCTTTGAAGGTTGCCTTGCTGTGCACGGACAACACACCAGCCAAACGACCGAAAATGAAGAATGTAGTGGAAATGCTGCGAGAGATAAAACAAAACTGA 2664 0.4107 MEALCLLHILLAWCLSCFELVGAELQEQAVLQAINQELRVPGWGDANNSDYCSWQGVNCGNHSLVESLDLSHRNLRGNVTLMSELKALMRLDLSNNNFDGLIPRAFGNLSDLEILDLSSNKFQGSIPPQLGGLRNLKSLNLSNNVLVGEIPMELQGLEKLQDFQISSNHLSGLIPSWVGNLTNLRLFTAYENRLDGRIPDDLGSISELQILNLHSNQLEGPIPATIFVPGKLEVLVLTQNNFSGELPKEIGNCKALSSVRIGNNHLVGTIPKTIGNLTSLTYFEADNNNLSGEVVSEFSKCSNLTLLNLASNGFTGTIPQDFGQLMNLQELILSGNSLFGDIPISILSCKNLNKLDISNNRFNGTIPNEICNITRLQYLLLDQNFIRGEIPHEIGNCAKLLELQLGSNILTGTIPPEIGRIRNLQIALNLSFNHLHGLLPPELGKLDKLVSLDVSNNRLSGNIPPELKGMLSLIEVNFSNNLLGGLVPTFVPFQKSPSSSFLGNKGLCGEPLNPSCGTLYDDHKAYHHRVSYRIILAVIGSGLAVFMSVTIVVLLFMIRERQEKVAKDAGIVDDSTNDNPTIIAGTVFVDNLKQAVDLDAVVKATLKDSNKLSGGTFSTVYKAIMPSGVVLSVRRLKSVDKTIIHHQNKMIRELERLSKVCHDNLVRPIGYVIYEDVALLLHHYFPNGTLVQLLHESTRKPEYQPDWPSRLSIAIGVAEGLAFLHHVAIIHLDISSGNVLLDANFKPLVGEIEISKLLDPTKGTASISAVAGSFGYIPPEYAYTMQVTAPGNVYSYGVVLLEILTTRLPVDEDFGEGVDLVKWVHSAPVRGETPEQILDARLSTVSFGWRKEMLAALKVALLCTDNTPAKRPKMKNVVEMLREIKQN* 888
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g01862 887 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 280 886 - -
Phac1g01862 887 SUPERFAMILY L domain-like 198 511 - -
Phac1g01862 887 SMART LRR_typ_2 205 229 IPR003591 -
Phac1g01862 887 SMART LRR_typ_2 446 469 IPR003591 -
Phac1g01862 887 SMART LRR_typ_2 157 180 IPR003591 -
Phac1g01862 887 SMART LRR_typ_2 373 397 IPR003591 -
Phac1g01862 887 SMART LRR_typ_2 109 133 IPR003591 -
Phac1g01862 887 SMART LRR_typ_2 85 108 IPR003591 -
Phac1g01862 887 SMART LRR_typ_2 325 349 IPR003591 -
Phac1g01862 887 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 25 173 - -
Phac1g01862 887 Pfam Leucine rich repeat 87 146 IPR001611 GO:0005515
Phac1g01862 887 FunFam Leucine-rich repeat receptor-like tyrosine-protein kinase PXC3 576 684 - -
Phac1g01862 887 FunFam Leucine-rich repeat receptor-like tyrosine-protein kinase PXC3 685 887 - -
Phac1g01862 887 Gene3D Phosphorylase Kinase; domain 1 574 684 - -
Phac1g01862 887 SUPERFAMILY L domain-like 46 292 - -
Phac1g01862 887 ProSitePatterns Tyrosine protein kinases specific active-site signature. 729 741 IPR008266 GO:0004672|GO:0006468
Phac1g01862 887 PRINTS Leucine-rich repeat signature 88 101 - -
Phac1g01862 887 PRINTS Leucine-rich repeat signature 133 146 - -
Phac1g01862 887 Gene3D Ribonuclease Inhibitor 228 518 IPR032675 -
Phac1g01862 887 SUPERFAMILY Protein kinase-like (PK-like) 606 884 IPR011009 -
Phac1g01862 887 Gene3D Ribonuclease Inhibitor 175 227 IPR032675 -
Phac1g01862 887 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 225 519 - -
Phac1g01862 887 Gene3D Ribonuclease Inhibitor 25 174 IPR032675 -
Phac1g01862 887 Gene3D Transferase(Phosphotransferase) domain 1 685 887 - -
Phac1g01862 887 Pfam Protein tyrosine and serine/threonine kinase 609 881 IPR001245 GO:0004672|GO:0006468
Phac1g01862 887 Coils Coil 878 887 - -
Phac1g01862 887 ProSiteProfiles Protein kinase domain profile. 606 887 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g01862 Phac-Chr1 28396167 28400559 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g01862 1 886 Receptor kinase-like Gene Family AT2G41820 72.891 0.0 1302
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Phac1g01862 PK_Tyr_Ser-Thr 5.8e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g01862 - - gmx:100789684 1645.94