Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g01861 ATGGAAGCTCTATGCTTGTTACACATTCTCCTAGCTTGGTGTCTGTCATGTTTTGAGCTTGTTGGTGCTGAGCTTCAGGAGCAAGCTGTATTACAGGCCATCAACCAAGAGCTTAGAGTCCCTGGATGGGGGGATGCCAACAACTCAGATTACTGCAGTTGGCAAGGTGTCAACTGTGGTAACCACTCATTGGTGGAGAGCTTGGATCTGTCTCACCGGAATCTTCGAGGTAATGTAACTTTAATGTCTGAGCTCAAAGCATTGATGCGGCTTGATCTTTCAAATAATAACTTTGATGGATTGATTCCACGTGCTTTTGGAAATTTATCTGATCTTGAAATTTTAGATTTGTCTTCAAATAAGTTCCAGGGTTCAATTCCACCTCAGTTGGGTGGTCTCAGAAACCTCAAATCATTGAACCTTTCCAATAATGTGCTTGTGGGAGAAATACCAATGGAACTTCAGGGCTTAGAGAAATTGCAAGATTTTCAAATTTCTAGTAACCATTTGAGTGGTCTTATACCTTCGTGGGTGGGAAATTTAACTAATCTGAGGCTTTTCACTGCTTATGAGAACCGTTTAGATGGCAGGATTCCTGATGATCTAGGCTCAATTTCTGAGCTTCAAATACTTAACTTGCACTCTAACCAGCTTGAAGGTCCAATACCAGCTACCATTTTCGTTCCAGGGAAGCTGGAAGTTCTGGTTCTCACCCAGAATAATTTTAGTGGCGAACTGCCTAAGGAAATTGGGAATTGCAAAGCCCTTTCCAGCGTTCGAATTGGAAACAACCATCTAGTAGGTACAATTCCTAAGACCATTGGAAATCTTACTAGCCTAACCTACTTTGAAGCTGACAATAATAATCTTTCTGGTGAGGTTGTGTCAGAATTTTCTAAGTGTTCTAATCTTACCCTCTTGAATTTGGCTTCAAATGGATTTACTGGAACAATTCCGCAAGACTTCGGACAACTTATGAATCTTCAGGAATTAATTCTTTCTGGAAATAGCCTATTTGGCGATATTCCAATATCAATTCTGAGTTGCAAAAATCTTAACAAGCTTGATATTAGCAACAACAGATTCAATGGGACAATACCAAATGAAATCTGCAATATCACCCGGTTGCAGTACTTGCTGTTGGATCAGAATTTCATAAGAGGAGAGATCCCCCATGAAATTGGTAATTGTGCAAAACTTCTTGAATTACAATTGGGCAGTAATATTTTGACTGGAACTATTCCTCCTGAGATTGGGCGCATTAGGAACTTGCAGATAGCTTTAAATTTGAGCTTCAATCATCTTCATGGACTTCTGCCCCCTGAATTGGGAAAACTGGACAAACTTGTTTCACTGGATGTTTCAAACAATCGGCTATCAGGTAATATCCCACCTGAACTTAAGGGAATGTTGAGTTTGATAGAGGTGAACTTCTCAAATAATCTGCTAGGAGGCTTGGTGCCAACATTTGTACCATTCCAAAAGAGTCCTAGTTCAAGTTTTCTGGGCAACAAAGGGCTTTGTGGAGAGCCTCTGAACCCTTCATGTGGAACCCTTTATGATGATCACAAGGCTTACCATCATCGGGTTTCTTACAGAATCATACTAGCTGTAATTGGTTCTGGTTTGGCTGTTTTTATGTCAGTAACTATAGTTGTCTTGCTGTTTATGATCAGAGAGAGGCAAGAAAAAGTAGCCAAAGATGCTGGAATTGTTGATGATAGCACCAATGACAACCCAACTATAATTGCAGGAACTGTTTTTGTTGATAATCTCAAACAAGCAGTAGACCTTGATGCTGTCGTTAAAGCAACTCTGAAAGACTCTAATAAGCTCAGCGGCGGAACTTTCAGCACAGTTTACAAGGCAATCATGCCTTCTGGGGTGGTCTTATCTGTTAGGAGATTGAAGTCTGTAGACAAGACAATAATCCACCACCAGAACAAAATGATTAGAGAACTTGAAAGACTGAGCAAAGTTTGTCATGATAATCTTGTGCGTCCCATTGGCTATGTCATTTATGAAGATGTTGCTCTTCTCTTGCATCATTATTTTCCCAATGGAACATTGGTTCAGCTTCTTCATGAATCTACCCGGAAACCTGAATATCAACCTGACTGGCCTTCTAGACTGTCCATTGCCATTGGTGTGGCAGAAGGTTTGGCTTTCCTTCATCATGTGGCAATCATCCATCTTGACATTTCTTCAGGCAATGTTCTCTTGGATGCAAATTTCAAGCCGTTAGTTGGGGAGATAGAGATTTCAAAACTTCTGGATCCAACCAAAGGCACTGCAAGTATTAGTGCAGTTGCTGGTTCCTTTGGTTACATACCACCAGGTATGCTACTTTCTGGCATGCAGTTCTCCCATCTATTCATCCTATTTACTTTTACAGTAAATAGTCTTTGCATTATCATCTCTTTACACATAATCATGTATGGCTTGTTAATTAATTTTACAATATTACATTAA 2472 0.4009 MEALCLLHILLAWCLSCFELVGAELQEQAVLQAINQELRVPGWGDANNSDYCSWQGVNCGNHSLVESLDLSHRNLRGNVTLMSELKALMRLDLSNNNFDGLIPRAFGNLSDLEILDLSSNKFQGSIPPQLGGLRNLKSLNLSNNVLVGEIPMELQGLEKLQDFQISSNHLSGLIPSWVGNLTNLRLFTAYENRLDGRIPDDLGSISELQILNLHSNQLEGPIPATIFVPGKLEVLVLTQNNFSGELPKEIGNCKALSSVRIGNNHLVGTIPKTIGNLTSLTYFEADNNNLSGEVVSEFSKCSNLTLLNLASNGFTGTIPQDFGQLMNLQELILSGNSLFGDIPISILSCKNLNKLDISNNRFNGTIPNEICNITRLQYLLLDQNFIRGEIPHEIGNCAKLLELQLGSNILTGTIPPEIGRIRNLQIALNLSFNHLHGLLPPELGKLDKLVSLDVSNNRLSGNIPPELKGMLSLIEVNFSNNLLGGLVPTFVPFQKSPSSSFLGNKGLCGEPLNPSCGTLYDDHKAYHHRVSYRIILAVIGSGLAVFMSVTIVVLLFMIRERQEKVAKDAGIVDDSTNDNPTIIAGTVFVDNLKQAVDLDAVVKATLKDSNKLSGGTFSTVYKAIMPSGVVLSVRRLKSVDKTIIHHQNKMIRELERLSKVCHDNLVRPIGYVIYEDVALLLHHYFPNGTLVQLLHESTRKPEYQPDWPSRLSIAIGVAEGLAFLHHVAIIHLDISSGNVLLDANFKPLVGEIEISKLLDPTKGTASISAVAGSFGYIPPGMLLSGMQFSHLFILFTFTVNSLCIIISLHIIMYGLLINFTILH* 824
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g01861 823 Pfam Leucine rich repeat 87 146 IPR001611 GO:0005515
Phac1g01861 823 SMART LRR_typ_2 446 469 IPR003591 -
Phac1g01861 823 SMART LRR_typ_2 205 229 IPR003591 -
Phac1g01861 823 SMART LRR_typ_2 157 180 IPR003591 -
Phac1g01861 823 SMART LRR_typ_2 373 397 IPR003591 -
Phac1g01861 823 SMART LRR_typ_2 109 133 IPR003591 -
Phac1g01861 823 SMART LRR_typ_2 85 108 IPR003591 -
Phac1g01861 823 SMART LRR_typ_2 325 349 IPR003591 -
Phac1g01861 823 Gene3D Ribonuclease Inhibitor 228 518 IPR032675 -
Phac1g01861 823 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 225 519 - -
Phac1g01861 823 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 259 802 - -
Phac1g01861 823 Gene3D Transferase(Phosphotransferase) domain 1 588 791 - -
Phac1g01861 823 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 25 173 - -
Phac1g01861 823 SUPERFAMILY Protein kinase-like (PK-like) 606 787 IPR011009 -
Phac1g01861 823 SUPERFAMILY RNI-like 174 487 - -
Phac1g01861 823 PRINTS Leucine-rich repeat signature 88 101 - -
Phac1g01861 823 PRINTS Leucine-rich repeat signature 133 146 - -
Phac1g01861 823 Gene3D Ribonuclease Inhibitor 175 227 IPR032675 -
Phac1g01861 823 ProSitePatterns Tyrosine protein kinases specific active-site signature. 729 741 IPR008266 GO:0004672|GO:0006468
Phac1g01861 823 FunFam Leucine-rich repeat receptor-like tyrosine-protein kinase PXC3 576 684 - -
Phac1g01861 823 SUPERFAMILY L domain-like 60 223 - -
Phac1g01861 823 Gene3D Ribonuclease Inhibitor 25 174 IPR032675 -
Phac1g01861 823 Pfam Protein tyrosine and serine/threonine kinase 609 752 IPR001245 GO:0004672|GO:0006468
Phac1g01861 823 ProSiteProfiles Protein kinase domain profile. 606 823 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g01861 Phac-Chr1 28396167 28400559 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g01861 1 807 Receptor kinase-like Gene Family AT2G41820 69.259 0.0 1105
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Phac1g01861 PK_Tyr_Ser-Thr 2.6e-17 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g01861 - - gmx:100789684 1437.17