Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g01857 ATGGCCGAATCATTTCTCTTCACCATCGCAGAGTCACTCATAACAAAGCTTGCTTCTCATGCTTTTCAAGAAGCTTCTCGATTGGTGGGTTTATATGACAATCTTGGAGACCTTACAAAGACTCTCTCTTTAGTCAAGGCTGTGCTGTTAGATGCTCAGCAAAAGCAGGAGCACAACCATCAGCTGCGCGAATGGCTCACTCAGCTCAAAACTGTCTTCTCCGATGCCGAAGATCTTTTGGATGAATTTGAGTGCCAAACACTGCGAAAGAAAGTGGTCAAAGCTAATGGTAGCACCAAAGACAAGGTAAGTCACTTCTTCTCAAGCTCTAATCCACTTCTCTTTCGTTACAAAATGGCTCAACAAATTAAAGATATCAGCAACAGACTAGACAAGGTTGCAGCTGATAGGCATAAGTTTAGTCTTCAAATAATTGATGTTGACACACGTGTTGTTCATCGGAGAGATATGACACACTCCCGTGTCAGTGATTCGGATGTAGTAGGAAGGAAACACGATAAAGAAAAGATCATAGAGCTTTTGATGTCGCACAATTCCAATGATGATGCAAGTCTTTCTGTTATTCCCATTGTGGGGATTGGAGGTTTGGGAAAGACTACACTTGCAAAGTTTGTGTTCAATGACAGCAGGATCCAGGAGTGTTTTCCAATGAAGATGTGGGTGTGTGTTTCTGATGACTTCGACATTAAACAACTCATTATCAAAATCATCAATTCTGCCAATGATCAAGATGCTCCTCCTCATCAACAGAATTTGAACATGTTGGATCTGGAGCAATTGCAAAATCAACTGAAAAACAAACTTTCCTCTCAAAAATTCTTACTCGTCTTAGACGATGTATGGAATGAAGATCGTGTTAAATGGGTTGAGCTGAGGAATTTAATCCAAGTAAGTGCAGCAGGAAGTAAAATCCTTGTGACCACACGTAGTCATTCAATTGCTTCCATGATGGGCTCAGTTCCCTCTCACATTTTAGAAGGTCTTTCCGAGGAGGATTCATTGTCTCTCTTTGTCAAGTGGGCATTTAAAGAAGGAGAAGAGGAAAAGCATCCTCACTTAGTAAATATTGGGAGAGAAATTGTGAAAAAATGTAGAGGGGTCCCATTGGCAGTGAGAACATTAGGGAGTTTACTATTCTCAAAATTTGAGGTCAGTGAATGGGAATATGTGTGTGATAATGAAATTTGGAATTTGCCTCAAAAAAAGGATGACATTTTACCTGCTCTTAAATTAAGTTATGATCTTATGCCATCATATTTGAGACAATGTTTTGCAATATTTTCCCTTTACCCAAAGGACTATGAACTCAATAGTTATGAAATAACTTCAATTTGGGGGGCACTTGGACTCATTGCACTACCAAAAAATAAAAGGACACTTGAAGATGTGGCCAATCAATATTTGCATGAACTTCTGTCAAGATCTTTTCTTCAAGATTTTACAAACTTTGGCACTGTTTATAGTTTTAGAATACATGATTTGGTGCATGATCTCGCTCAGTTTGTTGCAAGGAAAGAGTGTTTACACGTAAGTTCCAACATTCAAAATATTCCAGATAATGTTCGATATCTGTCTTTTGCTGAAAGCAGTTTGTTTAGCAATTTATACAACAAAAAATCGATAGCTGTGAGAACCATACTGTTTCCAAACGGTACAGAAGAAACCAATGGTGAAGATTTAATAAATACTTGTGTGTCAAAGTTTAAATATTTGCGAGTTTTGGATTTATGGGCTTCGACAATCGAGACTTTGCCCCGTACCATTGCTAAGTTGAAACACTTGAGATATTTGGACATTAGCCAAAATCTCAACATTAAGAGACTCCCCGAGTCTATTTGCAAGCTGCAAAGTCTGCAAGTGTTGAGGCTTGATGGATGCCTGGAGCTGGAAGCAATGCCCAAAGGATTAAGAAAGTTGATTAGTCTTCGTCAATTGGAGTTCAGTACAAAGCAATCTATTTTGCCTAACAATGACATTGCTAGTTTGGGCAATCTTGCAAATTTGTCTATTGAATCATGCCCTAATTTGGAGTCTATCTTCGGTGGTGTGAAATTCCCTGTTCTTAAAGTATTTAATGTCAGTGACTGTCAGAGTCTTAAGTTTTTGCCACTAGATGTTCAAATCTTTCCTGAGTTAGAAACTTTGTTTGTTGATAACTGTGGTACTTTGGACTTAGAACTGTGGAAGGACAACCACCGTGAAGAACAAAGCCACAAGCTAAAGTTAAAAACTGTTGAATTTTCAACTTTGTCACAGTTGGTGGCCTTGCCTAAATGGCTTCAAGAAGCTGCCAACTCCTTACAGTGCTTGATAATTTCAAATTGTGACAATATTAAAACACTTCCAGATTGGTTTACAACTTTGACTAACTTGAAAATACTTTCTATAACATATTGTCCAAATTTGGTATCTCTCCCAGATAACATTCATCACCTCACTGCACTAGAAACTTTGAGGATTGAAGGTTGTCATGATTTATGTGAAAAATATCAACCCCGTGTTGGAGAGTTTTGGCCCAAAATATCACACATAAAAAACATTTACATTGATGAACCAGAAGTCTGA 2586 0.3821 MAESFLFTIAESLITKLASHAFQEASRLVGLYDNLGDLTKTLSLVKAVLLDAQQKQEHNHQLREWLTQLKTVFSDAEDLLDEFECQTLRKKVVKANGSTKDKVSHFFSSSNPLLFRYKMAQQIKDISNRLDKVAADRHKFSLQIIDVDTRVVHRRDMTHSRVSDSDVVGRKHDKEKIIELLMSHNSNDDASLSVIPIVGIGGLGKTTLAKFVFNDSRIQECFPMKMWVCVSDDFDIKQLIIKIINSANDQDAPPHQQNLNMLDLEQLQNQLKNKLSSQKFLLVLDDVWNEDRVKWVELRNLIQVSAAGSKILVTTRSHSIASMMGSVPSHILEGLSEEDSLSLFVKWAFKEGEEEKHPHLVNIGREIVKKCRGVPLAVRTLGSLLFSKFEVSEWEYVCDNEIWNLPQKKDDILPALKLSYDLMPSYLRQCFAIFSLYPKDYELNSYEITSIWGALGLIALPKNKRTLEDVANQYLHELLSRSFLQDFTNFGTVYSFRIHDLVHDLAQFVARKECLHVSSNIQNIPDNVRYLSFAESSLFSNLYNKKSIAVRTILFPNGTEETNGEDLINTCVSKFKYLRVLDLWASTIETLPRTIAKLKHLRYLDISQNLNIKRLPESICKLQSLQVLRLDGCLELEAMPKGLRKLISLRQLEFSTKQSILPNNDIASLGNLANLSIESCPNLESIFGGVKFPVLKVFNVSDCQSLKFLPLDVQIFPELETLFVDNCGTLDLELWKDNHREEQSHKLKLKTVEFSTLSQLVALPKWLQEAANSLQCLIISNCDNIKTLPDWFTTLTNLKILSITYCPNLVSLPDNIHHLTALETLRIEGCHDLCEKYQPRVGEFWPKISHIKNIYIDEPEV* 862
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g01857 861 Gene3D Ribonuclease Inhibitor 744 842 IPR032675 -
Phac1g01857 861 Gene3D Ribonuclease Inhibitor 512 743 IPR032675 -
Phac1g01857 861 Gene3D - 334 418 IPR042197 -
Phac1g01857 861 Gene3D - 149 329 IPR027417 -
Phac1g01857 861 Gene3D - 419 508 IPR036388 -
Phac1g01857 861 Gene3D - 10 124 - -
Phac1g01857 861 Pfam Leucine rich repeat 577 633 IPR001611 GO:0005515
Phac1g01857 861 Pfam NB-ARC domain 171 421 IPR002182 GO:0043531
Phac1g01857 861 Pfam Rx N-terminal domain 11 98 IPR041118 -
Phac1g01857 861 PANTHER DISEASE RESISTANCE PROTEIN RP 46 827 IPR044974 GO:0006952
Phac1g01857 861 PRINTS Disease resistance protein signature 371 385 - -
Phac1g01857 861 PRINTS Disease resistance protein signature 194 209 - -
Phac1g01857 861 PRINTS Disease resistance protein signature 274 288 - -
Phac1g01857 861 PRINTS Disease resistance protein signature 793 809 - -
Phac1g01857 861 FunFam Probable disease resistance protein At1g61300 149 328 - -
Phac1g01857 861 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 151 432 IPR027417 -
Phac1g01857 861 SUPERFAMILY L domain-like 497 853 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g01857 Phac-Chr1 28366066 28368939 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g01857 192 824 WRKY Transcription Factor Family AT5G45050 22.271 7.38e-15 77.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g01857 - - pvu:PHAVU_001G133600g 1330.85