Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g01856 ATGGCCGAATCATTTCTCTTCACCATCGCAGAGTCACTCATAACAAAGCTTGCTTCTCATGCTTTTCAAGAAGCTTCTCGATTGGTGGGTTTATATGACAATCTTCGAGACCTTACAAAGACTCTCTCTTTAGTCAAGGCTGTGCTGTTAGATGCTCAGCAAAAGCAGGAGCACAACCATCAGCTGCGCGAATGGCTCACTCAGCTCAAAACTGTCTTCTCCGATGCCGAAGATCTTTTGGACGAATTTGAGTGCCAAACACTGCGAAAGAAAGTGGTCAAAGCTCATGGTAGCACCAAAGACAAGGTAAGTCACTTCTTCTCAAGCTCTAATCCACTTCTCTTTCGTTACAAAATGGCTCAACAAATTAAAGATATCAGCAACAGACTAGACAAGGTTGCAGCTGATAGGCACAAGTTTAGTCTTCAAATAATTGATGTTGACACACGTGTTGTCCATCGGAGAGATATGACACATTCCCGTGTGAGTGATTCGGATGTAGTAGGAAGGAAACACGATAAAGAAAAGATCATAGAGCTTTTGATGTCGCACAATTCCAATGATGATGCAAGTCTTTCTGTTATTCCCATTGTGGGGATTGGAGGCTTGGGAAAGACTACGCTTGCAAAGTTTGTGTTCAATGACAGCAGGATCCAAGAGTGTTTTCCAATGAAGATGTGGGTGTGTGTTTCTGATGACTTTGACATTAAACAACTCATTATCAAAATCATCAATTCTGCCAATGATCTAGATGCTCCTCCTCACCAACAGAATTTGAACATGTTGGATCTGGAGCAATTGCAAAATCAGCTTAAAAACAAACTTTCCAGCCAAAAATTCTTACTCGTCTTAGACGATGTATGGAACGAAGATCGTGTTAAATGGGTTGAGCTGAGGAATTTAATACAAGTAAGTGCAGCAGGAAGTAAAATCCTTGTGACCACACGTAGTCATTCAATTGCTTCCATGATGGGCTCAGTTCCCTCTCACATTTTAGAAGGTCTTTCTGAGGAGGATTCATTGTCTCTCTTTGTCAAGTGGGCATTTAAAGAAGGAGAAGAGGAAAAGCATCCTCACTTAGTAAATATCGGGAGAGAAATTGTGAAAAAATGCAAAGGGGTCCCATTGGCAGTGAGAACATTAGGGAGTTTACTATTCTCAAAATTTGAGGTCAGTGAATGGGAATATGTGTGTGATAATGAAATTTGGAATTTGTCTCAGAAAAAGGATGACATTTTACCTGCCCTTAAGTTAAGTTATGATCTCATGCCATCCTATTTGAGACAATGTTTTGTAATATTTTCCCTTTACCCTAAGGACTATCTATTCAATAGTTATACAATAACTTGCCTTTGGGGGGCACTTGGACTCATTGCATTACCAAAAAAGAACAGAACGCTTGAAGATGTGGCCAATCAATATTTGCATGAACTTCTGTCAAGATCTTTTCTTCAACATTTTAACAACTTTGGCTCTGTTTATCGTTTTACATTACATGATTTGGTGCATGATCTCGCTCTATTTGTTGCAAAGGATGAATCTCTATATGTAAGTTCCAGTATTCAAAATATTTCAGATAATGTTCGACATTTGTCTTTTGCTGAAAGCAGTTTGTTTAGCAATTTATGCAACAAAAATTCGGTAGCTGTAAGAACCATATTGTTTCCAAACGGTACAGAAGAAACCAATGATGAAGCTTTAATAAATACTTGTTTGTCAAAGTTCAAATATTTACGAGTCTTGGATTTATGGTCTTCGACAATCGAGATTTTGCCCCATAACATTGCTAAGTTGAAACATTTGAGATATTTGAACATTGGCAAAAATCTCAACATTAAGAGACTCCCCGAGTCTATTTGCAAGCTCCAAAGTCTGCAAGTATTAAGGCTTGACGGATGCATAGAGCTGGAAGCATTGCCCATAGGATTAAGAAAGTTAATCAGTCTCAGGCATTTAGAGTTCAGCACAAAGCAATCTATTTTGCCTGACAATGTGTTTGCTAGTCTAGACTTGCTTGCAAATTTGTCTATTGAGTCATGCCCTAATTTGGAGTCTATATTCGGAGATGTGAAATTCCCTGTTCTTAAAGCATTGTATATTAGTAATTTAATTTGGACTTGGAATTGTGGAAGGGCAACCACCTTGAAGAACAAAGCCACAAGCTAA 2166 0.3864 MAESFLFTIAESLITKLASHAFQEASRLVGLYDNLRDLTKTLSLVKAVLLDAQQKQEHNHQLREWLTQLKTVFSDAEDLLDEFECQTLRKKVVKAHGSTKDKVSHFFSSSNPLLFRYKMAQQIKDISNRLDKVAADRHKFSLQIIDVDTRVVHRRDMTHSRVSDSDVVGRKHDKEKIIELLMSHNSNDDASLSVIPIVGIGGLGKTTLAKFVFNDSRIQECFPMKMWVCVSDDFDIKQLIIKIINSANDLDAPPHQQNLNMLDLEQLQNQLKNKLSSQKFLLVLDDVWNEDRVKWVELRNLIQVSAAGSKILVTTRSHSIASMMGSVPSHILEGLSEEDSLSLFVKWAFKEGEEEKHPHLVNIGREIVKKCKGVPLAVRTLGSLLFSKFEVSEWEYVCDNEIWNLSQKKDDILPALKLSYDLMPSYLRQCFVIFSLYPKDYLFNSYTITCLWGALGLIALPKKNRTLEDVANQYLHELLSRSFLQHFNNFGSVYRFTLHDLVHDLALFVAKDESLYVSSSIQNISDNVRHLSFAESSLFSNLCNKNSVAVRTILFPNGTEETNDEALINTCLSKFKYLRVLDLWSSTIEILPHNIAKLKHLRYLNIGKNLNIKRLPESICKLQSLQVLRLDGCIELEALPIGLRKLISLRHLEFSTKQSILPDNVFASLDLLANLSIESCPNLESIFGDVKFPVLKALYISNLIWTWNCGRATTLKNKATS* 722
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g01856 721 Pfam Rx N-terminal domain 11 98 IPR041118 -
Phac1g01856 721 Gene3D - 149 329 IPR027417 -
Phac1g01856 721 SUPERFAMILY L domain-like 498 702 - -
Phac1g01856 721 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 151 432 IPR027417 -
Phac1g01856 721 Gene3D - 10 124 - -
Phac1g01856 721 Gene3D - 334 418 IPR042197 -
Phac1g01856 721 FunFam Probable disease resistance protein At5g66910 334 419 - -
Phac1g01856 721 Gene3D Ribonuclease Inhibitor 552 715 IPR032675 -
Phac1g01856 721 PANTHER DISEASE RESISTANCE PROTEIN RP 35 685 IPR044974 GO:0006952
Phac1g01856 721 Pfam Leucine rich repeat 577 633 IPR001611 GO:0005515
Phac1g01856 721 Pfam NB-ARC domain 171 421 IPR002182 GO:0043531
Phac1g01856 721 FunFam Probable disease resistance protein At1g61300 149 328 - -
Phac1g01856 721 Gene3D - 419 507 IPR036388 -
Phac1g01856 721 PRINTS Disease resistance protein signature 274 288 - -
Phac1g01856 721 PRINTS Disease resistance protein signature 194 209 - -
Phac1g01856 721 PRINTS Disease resistance protein signature 371 385 - -
Phac1g01856 721 PRINTS Disease resistance protein signature 620 636 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g01856 Phac-Chr1 28351571 28354261 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g01856 578 655 WRKY Transcription Factor Family AT4G12020 35.897 2.21e-06 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g01856 - - pvu:PHAVU_001G134400g 1138.25