Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g01853 ATGGCTGAATCATTTCTCTTCAGCATCGCAGAGTCACTCGGAGCAAAGATTGCTTCTCATGCTTTTCAAGAAGCTGCTCGATTGGTGGGTTTATATGACAATCTTGGAGATCTTACAAAGACTCTCTCTTTAGTCAAGGCTGTGCTGTTAGATGCTCAGCAAAAGCAGGAGCACAACCATCAGCTGCGCGAATGGCTCACTCAGCTCAAAACTGTCTTTTCTGATGCCGAAGATCTTTTGGATGAATTTGAGTGTCAAACACTGCGAAAGAAAGTGGTCAAAGCTCATGGTAGCACCAAAGACAAGGTAAGTCACTTCTTCTCAAGCTCTAATCCACTTCTCTTTCGTTACAAAATGGCTCAACAAATTAAAGATATCAGCAACAGACTAAACAAGGTTGCAGCTGATAGGCATAAGTTTAGTCTTCAAATAATTGATGTTGACACACGTGTTGTTCATCGGAGAGATATGACACATTCCCGTGTCAGTGATTCGGATGTCGTAGGAAGGAAACACGATAAAGAAAATATCATAGATCTTTTGATGCTGGCGAATTCTAATGATGATGATACAAGTGTTTCTGTTATCCCTGTTGTGGGGATTGGAGGCTTGGGAAAGACTACGCTTGCAAAGTTTGTATTCAATGACAGCAGGATCCAGGAGAGTTTTCCATTGAAGATGTGGGTGTGTGTTTCTGATGATTTTGACATTAAACAACTAATTATCAAAATCATTAATTCTGCCAATGATCAAGATGCTCCTCCTCACCAACAGAATTTGAACATGTTGGATCTGGAGCAATTGCAAAATCAGCTTAAAAACAAACTTTCCAGCCAAAAATTCTTACTCGTCTTAGACGATGTATGGAACGAAGATCGTGTTAAATGGGTTGAGCTGAGGAATTTAATACAAGTAAGTGCAGCAGGAAGTAAAATCCTTGTGACCACACGTAGTCATTCAATTGCTTCCATGATGGGCTCAGTTCCCTCTCACGTTTTAGAAGGTCTTTCTGAGGAGGATTCATTGTCTCTCTTTGTCAAGTGGGCATTTAAAGAAGGAGAAGAGGAAAAGCATCCTCACTTAGTAAATATTGGGAGAGAAATTGTGAAAAAATGCAAAGGGGTCCCATTAGCAGTGAGAACATTAGGGAGTTTACTATTCTCAAAATTTGAGGTGAGTGAATGGGAATATGTGTGTGATAATGAAATTTGGAATTTGCCTCAGAAAAAGGATGACATTTTACCTGCCCTTAAATTAAGTTATGATCTTATGCCATCATATTTGAGACAATGTTTTGCAATATTTTCCCTTTACCCAAAGGACTGTGCACTCAATAGTTATGAAATAACTTCAATTTGGGGGGCACTTGGACTCATTGCACTACCAAAAAAGAATAGGACACTTGAAGATGTGGCCAATCAATATTTGCATGAACTTCTGTCAAGATCTTTTCTTCAAGATTTTAAAAGCTTTGGCACTGTTTATAGTTTTAGAATACATGATTTGGTGCATGATCTTGCTCAGTTTGTTGCAAGGAAAGAGTGTTTACACGTAAGTTCTAACATTCAAAATATTTCAGATAATGTTCGACATGTGTCTTTTGCTGAAAGCAGTTTATTTAGTAATTTATTCAACAAAAAGTCGGTTGCTGTGAGAACCATACTGTTTTCAAACGGTACAAAAGAAATCAACGGTGAAGATTTAATAAATATTTGTATGTCAAAGTTCAAATATTTGCGAGTTTTGAATTTATGGGCTTCGACAATCGAGACTGTGCCCCGTACCATTGGTAAGTTGAAACACTTGAGATATTTGGACATTAGCCAAAATCTCAACATTAAGAGACTCCCCGAGTCTATTTGCAAGCTCCAAAGTCTGCAAGTGTTGAAGCTTGACGGATGCCTAGAGCTGGAAGCAATGCCAAAAGGATTAAGAAAGTTGATCAGTCTCCGTCAATTGGAGTTCAGTACAAAACAATCTGTTTTGCCTAACAATGACATTGCTAGTCTGGGCAATCTTGCAAATTTATCTATTGTATCAAGCCCTAATTTGGAGTCTATCTTCGGAGATATGAAATTCCCTATTCTAAAAGTATTTAATGTCAGTGACTGTGAGAGTCTTAAGTTTTTGCCACTAGATGTTCAAATCTTTCTCGAATTAGAAACTTTGTTTATTGATAGCTGTGGTAATTTGGACTTAGAACTATGGAAGGGCAACCATCATGAAGAACAAAGCCACAAGCTAAAGTTAAAAACTGTTGAATTTTCAACTTTGTCACAGTTGGTGGCCTTGCCTGAATGGCTTCAAGAAGCTACCAACTCCTTACAGTGCTTGGTAATTTCAAATTGCAATATCGAAACACTTCCAGATTGGTTTACAAATATGACTCACTTGGAAACACTTTGTATAACTTCTTGTCCAAATTTGGTATCTCTCCCAGATAACATCCATCACCTCACTGCACTTGAAACTTTGAGGATTGAAGATTGTCATGATTTATGTGAAAAATATCAACCCCATGTTGGAGAGCTTTGGCCCAAAATATCACACATAAAAAACATTTACATTGATGAACCAGAAGTCTCAGAAGAATTAGAGGAAGAGCAAGACGGAGAGGAATGCATTAACAGATAA 2634 0.3797 MAESFLFSIAESLGAKIASHAFQEAARLVGLYDNLGDLTKTLSLVKAVLLDAQQKQEHNHQLREWLTQLKTVFSDAEDLLDEFECQTLRKKVVKAHGSTKDKVSHFFSSSNPLLFRYKMAQQIKDISNRLNKVAADRHKFSLQIIDVDTRVVHRRDMTHSRVSDSDVVGRKHDKENIIDLLMLANSNDDDTSVSVIPVVGIGGLGKTTLAKFVFNDSRIQESFPLKMWVCVSDDFDIKQLIIKIINSANDQDAPPHQQNLNMLDLEQLQNQLKNKLSSQKFLLVLDDVWNEDRVKWVELRNLIQVSAAGSKILVTTRSHSIASMMGSVPSHVLEGLSEEDSLSLFVKWAFKEGEEEKHPHLVNIGREIVKKCKGVPLAVRTLGSLLFSKFEVSEWEYVCDNEIWNLPQKKDDILPALKLSYDLMPSYLRQCFAIFSLYPKDCALNSYEITSIWGALGLIALPKKNRTLEDVANQYLHELLSRSFLQDFKSFGTVYSFRIHDLVHDLAQFVARKECLHVSSNIQNISDNVRHVSFAESSLFSNLFNKKSVAVRTILFSNGTKEINGEDLINICMSKFKYLRVLNLWASTIETVPRTIGKLKHLRYLDISQNLNIKRLPESICKLQSLQVLKLDGCLELEAMPKGLRKLISLRQLEFSTKQSVLPNNDIASLGNLANLSIVSSPNLESIFGDMKFPILKVFNVSDCESLKFLPLDVQIFLELETLFIDSCGNLDLELWKGNHHEEQSHKLKLKTVEFSTLSQLVALPEWLQEATNSLQCLVISNCNIETLPDWFTNMTHLETLCITSCPNLVSLPDNIHHLTALETLRIEDCHDLCEKYQPHVGELWPKISHIKNIYIDEPEVSEELEEEQDGEECINR* 878
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g01853 877 Gene3D Ribonuclease Inhibitor 544 869 IPR032675 -
Phac1g01853 877 Gene3D - 420 509 IPR036388 -
Phac1g01853 877 Gene3D - 10 124 - -
Phac1g01853 877 PANTHER DISEASE RESISTANCE PROTEIN RP 46 830 IPR044974 GO:0006952
Phac1g01853 877 Gene3D - 149 330 IPR027417 -
Phac1g01853 877 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 151 433 IPR027417 -
Phac1g01853 877 PRINTS Disease resistance protein signature 621 637 - -
Phac1g01853 877 PRINTS Disease resistance protein signature 195 210 - -
Phac1g01853 877 PRINTS Disease resistance protein signature 372 386 - -
Phac1g01853 877 PRINTS Disease resistance protein signature 275 289 - -
Phac1g01853 877 Pfam Leucine rich repeat 578 634 IPR001611 GO:0005515
Phac1g01853 877 SUPERFAMILY L domain-like 498 852 - -
Phac1g01853 877 Pfam NB-ARC domain 173 422 IPR002182 GO:0043531
Phac1g01853 877 FunFam Probable disease resistance protein At1g61300 149 329 - -
Phac1g01853 877 Gene3D - 335 419 IPR042197 -
Phac1g01853 877 Pfam Rx N-terminal domain 12 98 IPR041118 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g01853 Phac-Chr1 28305313 28308381 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g01853 187 824 WRKY Transcription Factor Family AT5G45050 20.881 3.28e-08 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g01853 - - pvu:PHAVU_001G133600g 1308.51