Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g01852 ATGGTGACAGGTGGAAGGAATAGAGGGCGTGTTGGAGTGATCAAGAGCAGAGAGAAGAACAAGGGAAGTTTTGAGACTATCCATGTTCAAGATGCTACTGGGCACGAATTTGCAACTCGTTTGGGCAATGTGTTTACCATCGGCAAGGGAACAAAACCTTGGGTGTCTCTTCCCAAGGGTAAAGGTATCAAGCTTTCCATCATCGAGGAAGCTAGGAAGAGGATTTTCGCCCAACAAGCTACTGCTGCTTAA 252 0.4683 MVTGGRNRGRVGVIKSREKNKGSFETIHVQDATGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEEARKRIFAQQATAA* 84
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g01852 83 FunFam 40S ribosomal protein S4 1 64 - -
Phac1g01852 83 CDD KOW_RPS4 1 48 IPR041982 -
Phac1g01852 83 Pfam 40S ribosomal protein S4 C-terminus 31 75 IPR032277 -
Phac1g01852 83 Gene3D - 1 64 IPR014722 -
Phac1g01852 83 PANTHER 30S/40S RIBOSOMAL PROTEIN S4 1 73 IPR000876 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g01852 Phac-Chr1 28294795 28295046 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g01852 1 80 Cytoplasmic Ribosomal Protein Gene Family AT5G07090 88.750 2.36e-48 151
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g01852 K02987 - gmx:100812132 152.525